BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01212 (UTR included)
(1513 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A1A03 1027 0.0
BF14_1954_C1 688 0.0
>BF01023A1A03
Length = 694
Score = 1027 bits (518), Expect = 0.0
Identities = 553/564 (98%), Gaps = 3/564 (0%)
Strand = Plus / Plus
Query: 937 ctgatccggcttacaggagaaagttgaagctggctttgccgtctctacaacaaatcgatg 996
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 ctgatccggcttacaggaggaagttgaagctggtgttgccgtctctacaacaaatcgatg 60
Query: 997 caactctgtgtagataagaaattgttatcagtttgtccaataaagtatatagttttgtaa 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caactctgtgtagataagaaattgttatcagtttgtccaataaagtatatagttttgtaa 120
Query: 1057 agcatg---tacatgtatgtgaaatatatttggaaagtagtgtacgcactaccatagtca 1113
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcatgatgtacatgtatgtgaaatatatttggaaagtagtgtacgcactaccatagtca 180
Query: 1114 atttatcataatactattcactcattaaacaacatagtctattgtagtaccgtcccgaac 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atttatcataatactattcactcattaaacaacatagtctattgtagtaccgtcccgaac 240
Query: 1174 ttatctcaatacattattaaagtaactattgttgatatcattcattgtagactaaaaatt 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttatctcaatacattattaaagtaactattgttgatatcattcattgtagactaaaaatt 300
Query: 1234 gtatatgttataaatgaggaataaaaactatttgaaaagcgtattgtatcaatgaaagtt 1293
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtatttgttataaatgaggaataaaaactatttgaaaagcgtattgtatcaatgaaagtt 360
Query: 1294 gaataataaaatttacagtttcagaatgtctttccgtcatgctctaaatatgtttatcat 1353
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 gaataataaaatttacagtttcagaatgtctttccgtcatgctctgaatatgtttatcat 420
Query: 1354 gaattattactaatatttttcttgtaatcaaaatatttcatcagaactgaattaaaatct 1413
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 421 gaattattactaatatttttcttgtaatcaaattatttcatcagaactgaattaaaatct 480
Query: 1414 gtatgaatattgtaagtcatttattattccatgatataaagactgtattgccccttccaa 1473
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 481 gtatgaatattgtaagtcatttattattccattttataaagactgtattgccccttccaa 540
Query: 1474 tgaagtaattgtaaataaatgtaa 1497
||||||||||||||||||||||||
Sbjct: 541 tgaagtaattgtaaataaatgtaa 564
>BF14_1954_C1
Length = 966
Score = 688 bits (347), Expect = 0.0
Identities = 356/359 (99%)
Strand = Plus / Plus
Query: 502 tgctggaactcggtgacaatcgcatacgggaaatcaaaaacctagatggcatgaagtcgt 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tgctggaactcggtgacaatcgcatacgggaaatcaaaaacctagatggcatgaagtcgt 667
Query: 562 tgagagagctgtatcttggtaagaataaaataacgaaaatacagaatctcgaagatctcg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tgagagagctgtatcttggtaagaataaaataacgaaaatacagaatctcgaagatctcg 727
Query: 622 tgaatttagaaataatagtcctgcaaagtaaccgtctaacgagaatcgagaatcttgaac 681
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 728 tgaatttagaaataatagtcctgcaaagtaaccgtctaacaagaatcgagaatcttgaac 787
Query: 682 acttaacgaatctggaacagttgtacatatcggagaacggcatcagctccatagaaaacc 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 acttaacgaatctggaacagttgtacatatcggagaacggcatcagctccatagaaaacc 847
Query: 742 tgtcgaatcaagtcaagttgcaaactttagacctggctatgaacaggataacggtcattg 801
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 848 tgtcgaatcaagtcaagttgcaaacattagatctggctatgaacaggataacggtcattg 907
Query: 802 aaaatgtaagacatatgagcgagttggaggaactgtggttaaataacaatcaaatatct 860
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 aaaatgtaagacatatgagcgagttggaggaactgtggttaaataacaatcaaatatct 966
Score = 260 bits (131), Expect = 6e-69
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 160 agattgtacttgagatggaacttgataaagaaaatagaaggtctggatactctgaataaa 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 agattgtacttgagatggaacttgataaagaaaatagaaggtctggatactctgaataaa 402
Query: 220 ttagtggaactcgaactttatgacaatcaaatagttgtcatcgaaaaccttgacaacttg 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttagtggaactcgaactttatgacaatcaaatagttgtcatcgaaaaccttgacaacttg 462
Query: 280 gtgaatctgga 290
|||||||||||
Sbjct: 463 gtgaatctgga 473
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 202,127
Number of extensions: 3850
Number of successful extensions: 3850
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3849
Number of HSP's successfully gapped: 3
Length of query: 1513
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1496
Effective length of database: 8,119,229
Effective search space: 12146366584
Effective search space used: 12146366584
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)