BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01220 (UTR included)
(1726 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2381_C1 1394 0.0
>BF14_2381_C1
Length = 856
Score = 1394 bits (703), Expect = 0.0
Identities = 722/727 (99%), Gaps = 1/727 (0%)
Strand = Plus / Plus
Query: 382 gcattatgtctgttttacgacgtgtactgtgccaaaacaggtggttaccacaaaccagag 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gcattatgtctgttttacgacgtgtactgtgccaaaacaggtggttaccacaaaccagag 189
Query: 442 cactttccactcaagggcccttagtggatttaaaggtggataatgccggtgtggctgtaa 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cactttccactcaagggcccttagtggatttaaaggtggataatgccggtgtggctgtaa 249
Query: 502 tgactttacaaagaccacccgttaacagtcttaacctggacttactcaaagaaatgagca 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tgactttacaaagaccacccgttaacagtcttaacctggacttactcaaagaaatgagca 309
Query: 562 aatcattagacgaaattgcaaagaataaaagtaaagccatgattttaacatcagcatcac 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aatcattagacgaaattgcaaagaataaaagtaaagccatgattttaacatcagcatcac 369
Query: 622 caaaagtattttcagcaggtcttgatataatggagatgtataaaccagacctaaaacggg 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 caaaagtattttcagcaggtcttgatataatggagatgtataaaccagacctaaaacggg 429
Query: 682 tagaggagttctggacaactcttcaagaagtttggtttaaattgttcggatcaaacttta 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tagaggagttctggacaactcttcaagaagtttggtttaaattgttcggatcaaacttta 489
Query: 742 taaccgctgctgcaatcaatggtcatgctccagcgggcggttgtcttttggctatgtctt 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 taaccgctgctgcaatcaatggtcatgctccagcgggcggttgtcttttggctatgtctt 549
Query: 802 gtgaatatagagttatgactggtggcaatttctcgattggtctgaatgagactgctttag 861
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 550 gtgaatatagagttatgactggtggcaatttctcgattggcctgaatgagaccgctttag 609
Query: 862 ggattgtcgcccccaattggtttatggacaccatgaccaataccattcctgtgagagagg 921
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggattgtcgccccaaattggtttatggacaccatgaccaataccattcctgtgagagagg 669
Query: 922 ctgaatatgcactcacaactgctaggatgttcaatgttgaagaggctttaaaggttggac 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ctgaatatgcactcacaactgctaggatgttcaatgttgaagaggctttaaaggttggac 729
Query: 982 tcatagatgaagtcgcaactgacaaagatgacgctattgctaaatgcaaaggattcattg 1041
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ttatagatgaagtcgcaactgacaaagatgacgctattgctaaatgcaaaggattcattg 789
Query: 1042 ggaagttcgatagaatcccggcactggctcgttccatcacgaaattg-aaaatgagacaa 1100
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 790 ggaagttcgatagaatcccggcactggctcgttccatcacgaaattgaaaaatgagacaa 849
Query: 1101 gctgcta 1107
|||||||
Sbjct: 850 gctgcta 856
Score = 234 bits (118), Expect = 4e-61
Identities = 127/130 (97%)
Strand = Plus / Plus
Query: 84 aagaaccgaaaagtcaaagtccgcttttggactattttaaaagtttcgtaataaaatttt 143
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaacccataagtcaaagtccgcttttggactattttaaaagtttcgtaataaaatttt 60
Query: 144 attttattttcaattgacaattactttgataacttcgcaaaagtttgcacgtttcaactg 203
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 attttattttcaattgacaattactttgataacttcgcaaaagtttgcacgttacaactg 120
Query: 204 gttattattg 213
||||||||||
Sbjct: 121 gttattattg 130
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 235,482
Number of extensions: 5303
Number of successful extensions: 5303
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5302
Number of HSP's successfully gapped: 2
Length of query: 1726
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1709
Effective length of database: 8,119,229
Effective search space: 13875762361
Effective search space used: 13875762361
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)