BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01222 (UTR included)
(2470 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1042_C1 1776 0.0
>BF14_1042_C1
Length = 926
Score = 1776 bits (896), Expect = 0.0
Identities = 917/925 (99%)
Strand = Plus / Plus
Query: 433 ctacgtctaattaggtgacaagtgaaatctgtggaaattatttatttatcataggataga 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctacgtctaattaggtgacaagtgaaatctgtggaaattatttatttatcataggataga 61
Query: 493 tcacgaaaatgtcgttttttggagtagggaacccatttgctacgccggttggtcagaaga 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tcacgaaaatgtcgttttttggagtagggaacccatttgctacgccggttggtcagaaga 121
Query: 553 tagaacaagctaccgatggatctctaccatcagagaattgggcccttaatatggagatat 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tagaacaagctaccgatggatctctaccatcagagaattgggcccttaatatggagatat 181
Query: 613 gcgatataataaatagtagcactgacggacccaaggatgcaattaaggccataagaaaga 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gcgatataataaatagtagcactgacggacccaaggatgcaattaaggccataagaaaga 241
Query: 673 ggttgactcaaagtgcaggcaaaaactacaccgtggtcatgtatacactaactgtattgg 732
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 242 ggttgactcaaagtgcaggcaaaaactacaccgttgtcatgtatacactaactgtattgg 301
Query: 733 aaacctgtgttaaaaattgcagcaaaacatttcatgttctagtatgcaataaggagttta 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaacctgtgttaaaaattgcagcaaaacatttcatgttctagtatgcaataaggagttta 361
Query: 793 tatcagaactggtcaaactcattggacccaaaaatgatccaccgactgtggtacaggaga 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tatcagaactggtcaaactcattggacccaaaaatgatccaccgactgtggtacaggaga 421
Query: 853 aggttctcagcctcattcaatgttgggcggatgctttccaaaaccaacctgaattacagg 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aggttctcagcctcattcaatgttgggcggatgctttccaaaaccaacctgaattacagg 481
Query: 913 gcgttggtcaagtgtataatgaattgcgcaacaaaggtgtcgagtttccaatgacagacc 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gcgttggtcaagtgtataatgaattgcgcaacaaaggtgtcgagtttccaatgacagacc 541
Query: 973 tagatgccatggcgccaattttcacaccgcagaggagtgtgattgacggcggggagccgg 1032
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tagatgcgatggcgccaattttcacaccgcagaggagtgtgattgacggcggggagccgg 601
Query: 1033 tagttggttctccacaacgtactattcagcagaactctccaagtcgaccatctcaggagc 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tagttggttctccacaacgtactattcagcagaactctccaagtcgaccatctcaggagc 661
Query: 1093 aagtcgtagggacaattctgtcagacagtcagagcagtaagctgcgggcggacctgtcag 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aagtcgtagggacaattctgtcagacagtcagagcagtaagctgcgggcggacctgtcag 721
Query: 1153 tggttgaggggaacatgacagtcatgaacgacatgctgaccgaactcacaagccttccat 1212
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tggtcgaggggaacatgacagtcatgaacgacatgctgaccgaactcacaagccttccat 781
Query: 1213 acacacagcatcacgaacaagacatcgaactgctgaatgagctagcagacaccctgaagg 1272
||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 782 acacacagcatcacgaacaagacatcgaactactgaatgagctagcagacactctgannn 841
Query: 1273 cgatgcagactcgtgtcgctgagctggtgggtcgtttaggggaatccccgctgacggccg 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 cgatgcagactcgtgtcgctgagctggtgggtcgtttaggggaatccccgctgacggccg 901
Query: 1333 accttctgctgaccaatgaccgcct 1357
|||||||||||||||||||||||||
Sbjct: 902 accttctgctgaccaatgaccgcct 926
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,641
Number of extensions: 5809
Number of successful extensions: 5809
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5809
Number of HSP's successfully gapped: 1
Length of query: 2470
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2453
Effective length of database: 8,119,229
Effective search space: 19916468737
Effective search space used: 19916468737
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)