BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01223 (UTR included)
(1846 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3131_C1 1388 0.0
>BF14_3131_C1
Length = 821
Score = 1388 bits (700), Expect = 0.0
Identities = 716/722 (99%)
Strand = Plus / Plus
Query: 1 ttaaaagtgtatatacataaggatatcgaaacttttataaatttattgaatgtagtattc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 100 ttaaaagtgtatatacataaggatatcgaaacttctataaatttattgaatgtagtattc 159
Query: 61 aatactactttgcacgaaacaatgagtaaagtttagtgtgcatccatataatgtttatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aatactactttgcacgaaacaatgagtaaagtttagtgtgcatccatataatgtttatag 219
Query: 121 ttgaatcaaatacgtagagttatattctcgtttggcataagatattgtttatattaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ttgaatcaaatacgtagagttatattctcgtttggcataagatattgtttatattaaata 279
Query: 181 tttatgtttagtgatgataaaatgtcgcgcttaatagttgtgacatttgcttctgtaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tttatgtttagtgatgataaaatgtcgcgcttaatagttgtgacatttgcttctgtaaat 339
Query: 241 caccaatcgtggccttcgtgtccaaactaaagaatatattttagaattttaaaattggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 caccaatcgtggccttcgtgtccaaactaaagaatatattttagaattttaaaattggac 399
Query: 301 actatccaatttttattctggatcatttttatagttcacttttaatagtaggtcttagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 actatccaatttttattctggatcatttttatagttcacttttaatagtaggtcttagct 459
Query: 361 aaatacgaatctttaaaggtgatgtatatattgcataaatatatttttaattaaaaatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aaatacgaatctttaaaggtgatgtatatattgcataaatatatttttaattaaaaatat 519
Query: 421 atttattgattgcttacatcatttgaatattataagaactatgtatattaagtttgattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 atttattgattgcttacatcatttgaatattataagaactatgtatattaagtttgattt 579
Query: 481 agtataaatccattcttcagatgccagaactcacagtgagatcagaaatatatgatgaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 agtataaatccattcttcagatgccagaactcacagtgagatcagaaatatatgatgaat 639
Query: 541 ataactacaaaactgagatgaaaccaagtaaagaaggcaatgtgatatcgctgtttccat 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 640 ataactacaaaactgagatgaaaccaagtaaagaaggcaatgtgatatcgctatttccat 699
Query: 601 tttggttaccggccaggaacaatactttaaaatttgatgaagatgatgacttggatgttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tttggttaccggccaggaacaatactttaaaatttgatgaagatgatgacttggatgttg 759
Query: 661 aaagacggcataaggaagtaattaaaatagaacacagttcaaaaacaaaaatcgctatgg 720
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 760 aaagacggcataaggaanntattaaaatagaacacagttcaaaaacaaaaatcactatgg 819
Query: 721 tc 722
||
Sbjct: 820 tc 821
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 294,949
Number of extensions: 6838
Number of successful extensions: 6838
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6838
Number of HSP's successfully gapped: 1
Length of query: 1846
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1829
Effective length of database: 8,119,229
Effective search space: 14850069841
Effective search space used: 14850069841
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)