BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01229 (UTR included)
(3244 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2464_C1 593 e-169
>BF14_2464_C1
Length = 881
Score = 593 bits (299), Expect = e-169
Identities = 327/335 (97%), Gaps = 1/335 (0%)
Strand = Plus / Minus
Query: 1 tgcgtatttaaaacattttctatccctttgtcaaatgcgattttctgtagagttcttatt 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 334 tgcgtatttaaaacattttctatccctttgtcaaaggcgattttctgtagagtttttatt 275
Query: 61 ttatggtaaataatagatttttcttcattttcaattttcattataacatcattgtagtac 120
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 274 ttatggtaaataatagatttttcttcattttctattttcattataacatcattgtacaac 215
Query: 121 agttataaactgaatgaatatttaatatagtacatactataaaagttacaaaagtttaaa 180
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 agttatagaatgaatgaatatttaatatagtacatactataaaagttacaaaagtttaaa 155
Query: 181 aacagtcacattgaactcgccagaagctgtcaaaacggaaacttcaaatttcattatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aacagtcacattgaactcgccagaagctgtcaaaacggaaacttcaaatttcattatgct 95
Query: 241 ttttaataaatgaatagtagcagaggaatttgtttttcagattattttagttttgataga 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 94 ttttaataaatgaatagtagcagaggaatttgtttttcagattattttag-tttgataga 36
Query: 301 actactttaatccagtttataattttaaatattac 335
|||||||||||||||||||||||||||||||||||
Sbjct: 35 actactttaatccagtttataattttaaatattac 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 368,706
Number of extensions: 19197
Number of successful extensions: 19197
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19196
Number of HSP's successfully gapped: 1
Length of query: 3244
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3226
Effective length of database: 8,109,745
Effective search space: 26162037370
Effective search space used: 26162037370
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)