BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01236 (UTR included)
(1627 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 131 4e-30
BF01037A2H12 94 8e-19
BF14_335_C2 86 2e-16
BF01031B2E06 84 8e-16
>BF01047B2H03
Length = 758
Score = 131 bits (66), Expect = 4e-30
Identities = 129/150 (86%)
Strand = Plus / Minus
Query: 638 aaaagaaataactacaaaccagcgatcaataggttttgtgagagaacacactagggctac 697
|||||||||||| |||||| ||||| ||| ||||||||||||||| ||| ||||||||
Sbjct: 211 aaaagaaataaccacaaacgggcgattaattggttttgtgagagaagacattagggctat 152
Query: 698 aaaatcaaacgtcaagccttactctatgattaaagcggcttcagattggactataatgat 757
||| |||||| |||||||||||||||| ||||||||| ||| ||||| |||||||| ||
Sbjct: 151 aaagtcaaacatcaagccttactctatccttaaagcggtttcggattgcactataatcat 92
Query: 758 cgatacgtatgagaaacaatataaaatccc 787
|||||||||| | ||| ||| ||||||||
Sbjct: 91 ggatacgtatggggaacgatacaaaatccc 62
>BF01037A2H12
Length = 773
Score = 93.7 bits (47), Expect = 8e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 967 ttgtaaatttgtacgcggtggaagtaggagcaagaggtataacagccaaatctctctaca 1026
|||| |||||||||| ||| |||||||||| |||||||||| ||||||||||||| |||
Sbjct: 666 ttgtgaatttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgaca 725
Query: 1027 acctgctaaaagact 1041
|||||||||||||||
Sbjct: 726 acctgctaaaagact 740
>BF14_335_C2
Length = 1827
Score = 85.7 bits (43), Expect = 2e-16
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 999 agaggtataacagccaaatctctctacaacctgctaaaagactggggtctgtcagaaact 1058
|||||||||||||| ||||||||||||| ||| |||||| ||| ||| ||||| ||||
Sbjct: 1106 agaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaact 1047
Query: 1059 aacttcagttcattcttggaacgtgcgtcgaatgcagccctagcaggttcttttcaaat 1117
||| |||||||||||| |||||| | ||||| |||| |||| |||||| ||||||||
Sbjct: 1046 aacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaat 988
>BF01031B2E06
Length = 707
Score = 83.8 bits (42), Expect = 8e-16
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 948 ctcactaagaataggttcgttgtaaatttgtacgcggtggaagtaggagcaagaggtata 1007
|||||||||||||||||||| | ||||||||||||||| ||||| ||||| || | | ||
Sbjct: 488 ctcactaagaataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgta 547
Query: 1008 acagccaaatctctctacaacctgctaaaa 1037
| ||| ||||||||| ||||||| ||||||
Sbjct: 548 aaagctaaatctctccacaacctactaaaa 577
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 193,668
Number of extensions: 3952
Number of successful extensions: 3952
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 3952
Number of HSP's successfully gapped: 4
Length of query: 1627
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1610
Effective length of database: 8,119,229
Effective search space: 13071958690
Effective search space used: 13071958690
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)