BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01246 (UTR included)
(2872 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005A1D05 1285 0.0
>BF01005A1D05
Length = 720
Score = 1285 bits (648), Expect = 0.0
Identities = 663/668 (99%)
Strand = Plus / Plus
Query: 2042 cttcgacaaggtgtacaagagattcaacgagatggactccttcatgttcgctggagtact 2101
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 49 cttcgacaaggtgtacaagagattcaacgagatggattccttcatgttcgctggagtact 108
Query: 2102 gaacggagcgttcggcttcatcactaccaacgacgaattgaacaggtttaaaaaattcgc 2161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gaacggagcgttcggcttcatcactaccaacgacgaattgaacaggtttaaaaaattcgc 168
Query: 2162 tttggaccacaaatctgagctgcagccaatgtctcacacgctccagaagatagctgacag 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tttggaccacaaatctgagctgcagccaatgtctcacacgctccagaagatagctgacag 228
Query: 2222 cggagcggtcaggatatcctggatcaacacacacgctaggaacattaacaactggttcaa 2281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cggagcggtcaggatatcctggatcaacacacacgctaggaacattaacaactggttcaa 288
Query: 2282 gacatatgtagaagaacattcaacaaacagccaaacaacggagacgccaaacgaaaccat 2341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gacatatgtagaagaacattcaacaaacagccaaacaacggagacgccaaacgaaaccat 348
Query: 2342 cacagacagcaacgtcactttaagttcttaaagttaactcgttatagctaataaattaaa 2401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cacagacagcaacgtcactttaagttcttaaagttaactcgttatagctaataaattaaa 408
Query: 2402 catacattccaaagtcgtttaaatataaaatattaactgtataatgtaaaatcgatatta 2461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 catacattccaaagtcgtttaaatataaaatattaactgtataatgtaaaatcgatatta 468
Query: 2462 aatttaaatcgatacgattgatttgtatgttatctgtatttattattaatctgtgcttat 2521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aatttaaatcgatacgattgatttgtatgttatctgtatttattattaatctgtgcttat 528
Query: 2522 tacaaagtgtcactgcccgcaaaaatacaattcacttaaacttgtctaacacctaaatca 2581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tacaaagtgtcactgcccgcaaaaatacaattcacttaaacttgtctaacacctaaatca 588
Query: 2582 tgtattcctttaagaatataccttaagtacttttttattgagttgtgagatgtttagttt 2641
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 589 tgtattcctttaagaatataccttaagtaattttttattgagttgtgagatgtttagttt 648
Query: 2642 aagtatataaataaaatatcataatacattgtatattaagatctttacacacaaagctgt 2701
|||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 649 aagtgtataaataaaatatcataatacattatatattaagatctttacacacaaagctat 708
Query: 2702 cttattaa 2709
||||||||
Sbjct: 709 cttattaa 716
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 320,111
Number of extensions: 6564
Number of successful extensions: 6564
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6564
Number of HSP's successfully gapped: 1
Length of query: 2872
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2855
Effective length of database: 8,119,229
Effective search space: 23180398795
Effective search space used: 23180398795
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)