BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01256 (UTR included)
(2176 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B1F10 1495 0.0
>BF01034B1F10
Length = 790
Score = 1495 bits (754), Expect = 0.0
Identities = 781/790 (98%)
Strand = Plus / Plus
Query: 477 cgaagaggacggacgtgtacaactatgtatagatttcttatattatttgtgttaagtaca 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgaagaggacggacgtgtacaactatgtatagatttcttatattatttgtgttaagtaca 60
Query: 537 acttcagctgcccaaagcgatgttgagacgtcaaaaagatcgatacaaggaaattcaaat 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttcagctgcccaaagcgatgttgagacgtcaaaaagatcgatacaaggaaattcaaat 120
Query: 597 gggaacagaaaaaatgttaacttgaattcagacagcgaactcaatttggaccctatccca 656
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gggaacagaaaaaattttaacttgaattcagacagcgaactcaatttggaccctatccca 180
Query: 657 aaacctttcgtgacacgtcagaaaattcaaccgactacagataaggaagaaagtgaaata 716
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaccattcgtgacacgtcagaaaattcaaccgactacagataaggaagaaagtgaaata 240
Query: 717 aatttggatccagatgcgaaagtcatagctgaatacttctcctccgggcagtctacagcc 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatttggatccagatgcgaaagtcatagctgaatacttctcctccgggcagtctacagcc 300
Query: 777 agtcaatcacacacggtcgctgcagacggcctcagtaataaacgtgactcaccaagtaac 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtcaatcacacacggtcgctgcagacggcctcagtaataaacgtgactcaccaagtaac 360
Query: 837 gcgacagattcctcagacgatgttaatttggatcagtcggatataaatataaattgcacg 896
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 361 gcgacagattcctcagacgatgttaatttggatcagtcggatataaatataaattgtacg 420
Query: 897 agggacgatggcacgccgggtgtgtgtgtcttgtattatcaatgcaacaccgacgacggt 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agggacgatggcacgccgggtgtgtgtgtcttgtattatcaatgcaacaccgacgacggt 480
Query: 957 caagttatcactgatggcaactcgctcatagatgtcaggctaaaagacggcgcctgttca 1016
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caagttattactgatggcaactcgctcatagatgtcaggctaaaagacggcgcctgttca 540
Query: 1017 cactacctacaagtctgctgcgtgttgaacgtagtccaggagaaacctgtcatattggaa 1076
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 541 cactacctacaagtctgctgcgtgttgaacgtagtccaggacaaacctgtcatattggaa 600
Query: 1077 gataaagtgcctgatgttcccgcaaaatccaaaaaatgtggttggaataatccagcatta 1136
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 601 gataaagtgcccgatgttcccgcaaaatccaaaaaatgtggttggaataatccagcactt 660
Query: 1137 aatatattccaaacgagagaaacagctggtctggatgacggcatttatgccaattacggc 1196
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 661 aatatattccaaacgagagaaacagctggtcttgatgacggcatttatgccaattacggc 720
Query: 1197 gactttccctggatgatagccgttattagaaatcgaaacgagactgaagaatggtcgaaa 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gactttccctggatgatagccgttattagaaatcgaaacgagactgaagaatggtcgaaa 780
Query: 1257 aatgactacc 1266
||||||||||
Sbjct: 781 aatgactacc 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 345,696
Number of extensions: 10156
Number of successful extensions: 10156
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10156
Number of HSP's successfully gapped: 1
Length of query: 2176
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2159
Effective length of database: 8,119,229
Effective search space: 17529415411
Effective search space used: 17529415411
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)