BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01261 (UTR included)
(1363 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1D02 224 3e-58
BF01052B1H02 212 1e-54
BF01023A2A12 212 1e-54
BF01037B1H08 172 9e-43
BF01010B2F09 168 1e-41
BF01029B2F12 157 6e-38
BF01031B1E12 153 9e-37
BF01040A1G09 94 7e-19
BF01062A1B01 70 1e-11
BF01062A1A05 70 1e-11
>BF01056B1D02
Length = 778
Score = 224 bits (113), Expect = 3e-58
Identities = 213/240 (88%), Gaps = 11/240 (4%)
Strand = Plus / Plus
Query: 771 gtcgtggtggcctggaggttaaaaggcccgcctctcatacgtgggggcgcgggttcgaaa 830
||||||||||||||||||||||| | ||||| ||| |||| ||||||||||| ||||
Sbjct: 459 gtcgtggtggcctggaggttaaagg--ccgcccatca--cgtgagggcgcgggtt-gaaa 513
Query: 831 cctggcaagtaccaatgtggt-ttttccgagtgagtatgtactttctaagattatttaga 889
||||||||||||||||||| | |||||||||| | ||||||||||||||| || |||||
Sbjct: 514 cctggcaagtaccaatgtgatcttttccgagtca-tatgtactttctaagggtagttaga 572
Query: 890 caccactgacggacggtgaaggaaattatcgcgaggaaacctggtcttataatttcaaaa 949
||||||||||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 573 caccactgacg----gtgaaggaaaacgtcgtgaggaaacctggtcttataatttcaaat 628
Query: 950 tataagattgaaatcgccaacccgtcttgagcaagcgcggtgattaatgctctaaccttc 1009
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 629 tataagattgaaatcgccaacccgtcttgagcaagcgtggtggttaatgctctaaccttc 688
>BF01052B1H02
Length = 790
Score = 212 bits (107), Expect = 1e-54
Identities = 213/245 (86%), Gaps = 5/245 (2%)
Strand = Plus / Minus
Query: 773 cgtggtggcctggaggttaaaaggcccgcctctcatacgtgggggcgcgggttcgaaacc 832
||||||||||| ||||||||| |||||||||||| ||| || ||| || |||||||| ||
Sbjct: 561 cgtggtggcctagaggttaaa-ggcccgcctctcgtacatgagggtgcaggttcgaatcc 503
Query: 833 tggcaagtaccaatgtggt---ttttccgagtgagtatgtactttctaagattatttaga 889
||| |||||| |||||| | |||| ||| ||| |||| ||||| ||||| ||||||||
Sbjct: 502 tgggaagtactaatgtgatctttttttcgaatga-tatgcactttttaagagtatttaga 444
Query: 890 caccactgacggacggtgaaggaaattatcgcgaggaaacctggtcttataatttcaaaa 949
||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||
Sbjct: 443 cactactgacggacggtgaaggaaaacatcgtgaggaaacctggtcttataatttgaaat 384
Query: 950 tataagattgaaatcgccaacccgtcttgagcaagcgcggtgattaatgctctaaccttc 1009
|| || |||||||||||||||||||||||||||||| |||| ||||||||||||| |||
Sbjct: 383 aattagtttgaaatcgccaacccgtcttgagcaagcgtggtgcttaatgctctaactttc 324
Query: 1010 tccat 1014
|||||
Sbjct: 323 tccat 319
>BF01023A2A12
Length = 723
Score = 212 bits (107), Expect = 1e-54
Identities = 185/207 (89%), Gaps = 3/207 (1%)
Strand = Plus / Plus
Query: 809 acgtgggggcgcgggttcgaaacctggcaagtaccaatgtggt-ttttccgagtgagtat 867
||||| ||||||||||| ||||||||||||||||||||||| | |||||||||| | ||
Sbjct: 88 acgtgagggcgcgggtt-gaaacctggcaagtaccaatgtgatcttttccgagtcac-at 145
Query: 868 gtactttctaagattatttagacaccactgacggacggtgaaggaaattatcgcgaggaa 927
||||||||||| | ||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct: 146 gtactttctaacagtatttagacaccactgacggacggtgaaggagaacgtcgtgaggaa 205
Query: 928 acctggtcttataatttcaaaatataagattgaaatcgccaacccgtcttgagcaagcgc 987
||||||||||||||||||||| |||||| |||||||| |||| | | ||||||| ||||
Sbjct: 206 acctggtcttataatttcaaattataagtttgaaatcaccaatcagccttgagcgagcgt 265
Query: 988 ggtgattaatgctctaaccttctccat 1014
|||||||||||||||||||||||||||
Sbjct: 266 ggtgattaatgctctaaccttctccat 292
>BF01037B1H08
Length = 758
Score = 172 bits (87), Expect = 9e-43
Identities = 129/139 (92%), Gaps = 3/139 (2%)
Strand = Plus / Plus
Query: 771 gtcgtggtggcctggaggttaaaaggcccgcctctcatacgtgggggcgcgggttcgaaa 830
||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 71 gtcgttgtggcctggaggttaaa-ggcccgcctctcatacgtgaaggcgcgggttcgaaa 129
Query: 831 cctggcaagtaccaatgtggt-ttttccgagtgagtatgtactttctaagattatttaga 889
||||||||||||||||||| | |||||||||| | |||||||||||||||| |||||||
Sbjct: 130 cctggcaagtaccaatgtgatcttttccgagtca-tatgtactttctaagaatatttagt 188
Query: 890 caccactgacggacggtga 908
|||||||||||||||||||
Sbjct: 189 caccactgacggacggtga 207
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 956 attgaaatcgccaacccgtcttgagcaagcgcggtgattaatgctctaaccttct 1010
||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 238 attgaaatcgccaccccgtcttgagcaagcgtggtgcttaatgctctaaccttct 292
>BF01010B2F09
Length = 764
Score = 168 bits (85), Expect = 1e-41
Identities = 205/239 (85%), Gaps = 7/239 (2%)
Strand = Plus / Minus
Query: 777 gtggcctggaggttaaaaggcccgcctctcatacgtgggggcgcgggttcgaaacctggc 836
|||| |||||||||||| |||| |||||||| ||||| | ||||||||||||||||| |
Sbjct: 544 gtgggctggaggttaaa-ggccagcctctcacacgtgaagtcgcgggttcgaaacctgac 486
Query: 837 aagtaccaatgtggtttttc-cgagtgagtatgtactttctaagattatttagacaccac 895
||||||||||||| | || ||||| | |||||||||||||||| ||||||||| ||||
Sbjct: 485 aagtaccaatgtgatcttcatcgagtca-tatgtactttctaagagtatttagacgccac 427
Query: 896 tgacggacggtgaaggaaattatcgcgaggaaacctggtcttataatttcaaaatataag 955
||||||||||||||||| | ||| |||||||||||| || |||| ||| |||||
Sbjct: 426 tgacggacggtgaaggagaatat---gaggaaacctggatttgtaataa-aaattataaa 371
Query: 956 attgaaatcgccaacccgtcttgagcaagcgcggtgattaatgctctaaccttctccat 1014
||| |||||||||| ||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 370 attaaaatcgccaatccgtcttgagcgagcgtggtgattaatgctctaaccttctccat 312
>BF01029B2F12
Length = 749
Score = 157 bits (79), Expect = 6e-38
Identities = 116/127 (91%), Gaps = 1/127 (0%)
Strand = Plus / Minus
Query: 815 gggcgcgggttcgaaacctggcaagtaccaatgtggtttttccgagtgagtatgtacttt 874
||||||||||||||||||||||||||||||||||| ||| | ||| | ||||||||||
Sbjct: 668 gggcgcgggttcgaaacctggcaagtaccaatgtgatttatgagagaca-tatgtacttt 610
Query: 875 ctaagattatttagacaccactgacggacggtgaaggaaattatcgcgaggaaacctggt 934
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 609 ctaagagtatttagacaccactgacggacggtgaaggaagacatcgcgaggaaacctggt 550
Query: 935 cttataa 941
|||||||
Sbjct: 549 cttataa 543
>BF01031B1E12
Length = 730
Score = 153 bits (77), Expect = 9e-37
Identities = 117/129 (90%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 885 ttagacaccactgacggacggtgaaggaaattatcgcgaggaaacctggtcttataattt 944
|||| ||||||||| |||||||| ||||| |||| |||||||||||||||||| |||
Sbjct: 36 ttaggcaccactgagagacggtgagggaaaacatcgtgaggaaacctggtcttatgatta 95
Query: 945 -caaaatataagattgaaatcgccaacccgtcttgagcaagcgcggtgattaatgctcta 1003
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 96 gcaaagtataagattgaaatcgccaacccgtcttgagcaagcgtggtgattaatgctcta 155
Query: 1004 accttctcc 1012
|||||||||
Sbjct: 156 accttctcc 164
>BF01040A1G09
Length = 753
Score = 93.7 bits (47), Expect = 7e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 940 aatttcaaaatataagattgaaatcgccaacccgtcttgagcaagcgcggtgattaatgc 999
||||||||| |||||| |||||||||||||||| ||||||||||||| || |||||||||
Sbjct: 10 aatttcaaattataagtttgaaatcgccaacccatcttgagcaagcgtggcgattaatgc 69
Query: 1000 tctaaccttctccat 1014
| ||||||||||||
Sbjct: 70 ttaaaccttctccat 84
>BF01062A1B01
Length = 807
Score = 69.9 bits (35), Expect = 1e-11
Identities = 83/98 (84%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 917 atcgcgaggaaacctggtcttataatttcaaaatataagattgaaatcgccaacccgtct 976
||||||||||||||||| ||| |||||| ||| || ||| ||| ||||||||| ||| ||
Sbjct: 218 atcgcgaggaaacctggacttgtaatttaaaattagaagtttggaatcgccaatccgcct 159
Query: 977 tgagcaagcgcggtgattaatgctctaaccttctccat 1014
||||| ||| ||||| | |||| ||||||||||||||
Sbjct: 158 tgagcgagctcggtggtcaatg--ctaaccttctccat 123
>BF01062A1A05
Length = 777
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 974 tcttgagcaagcgcggtgattaatgctctaaccttctcc 1012
||||||||||||| |||||||||||||||||||||||||
Sbjct: 513 tcttgagcaagcgtggtgattaatgctctaaccttctcc 551
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 240,107
Number of extensions: 21568
Number of successful extensions: 21568
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 21558
Number of HSP's successfully gapped: 14
Length of query: 1363
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1346
Effective length of database: 8,119,229
Effective search space: 10928482234
Effective search space used: 10928482234
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)