BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01263 (UTR included)
(2080 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 151 5e-36
BF01060B1D11 107 7e-23
>BF01047B2H03
Length = 758
Score = 151 bits (76), Expect = 5e-36
Identities = 203/243 (83%), Gaps = 3/243 (1%)
Strand = Plus / Plus
Query: 1719 atggatcttatatttagcattctcgtcttgccgaattagtg--tttaatatatccgtatc 1776
|||||| |||||| | ||||||||||||||||||| | | || ||||||||||||||
Sbjct: 490 atggatgttatatccatcattctcgtcttgccgaataaaagacttcaatatatccgtatc 549
Query: 1777 gttggccttcctacttgatcctaatcctactct-gttattttgcactcctatcatatact 1835
| ||||||| | |||||||||||||||||||| |||| |||| ||||||||||| |||
Sbjct: 550 ttgggccttcttccttgatcctaatcctactctcgttactttgtgctcctatcataaact 609
Query: 1836 gtctatggaatttaagtcttgattctagctctaggacatctttgtattttgggagtgatg 1895
|| ||||||||| ||||||||| | ||| || || ||||| | | ||||| ||||||||
Sbjct: 610 gtttatggaattgaagtcttgactttagttcaggggcatctctattttttgagagtgatg 669
Query: 1896 taacgacgtcatcatggggtttctccaggatatgtctcttgcaaaatcttaggtgtttat 1955
||| ||| |||| ||||| |||| || |||||||||||||| ||| ||||| ||||||||
Sbjct: 670 taatgacatcattatgggctttccccgggatatgtctcttggaaactcttaagtgtttat 729
Query: 1956 aga 1958
|||
Sbjct: 730 aga 732
>BF01060B1D11
Length = 799
Score = 107 bits (54), Expect = 7e-23
Identities = 164/198 (82%), Gaps = 2/198 (1%)
Strand = Plus / Plus
Query: 1763 aatatatccgtatcgttggccttcctacttgatcctaatcctactct-gttattttgcac 1821
||||||||| |||| | |||||| | |||||||||||||||||||| |||| |||| |
Sbjct: 364 aatatatccatatcttgagccttcttccttgatcctaatcctactctcgttactttgtgc 423
Query: 1822 tcctatcatatactgtctatggaatttaagtctt-gattctagctctaggacatctttgt 1880
|||||||||| ||||| | ||||||| |||||| || | ||| ||| || ||||| |
Sbjct: 424 tcctatcataaactgtttgtggaattgaagtctcagactttagttctgggccatctccgg 483
Query: 1881 attttgggagtgatgtaacgacgtcatcatggggtttctccaggatatgtctcttgcaaa 1940
||||||||||||||||| ||| |||| ||||| |||| || |||||||||||||| |||
Sbjct: 484 tttttgggagtgatgtaatgacatcattatgggctttccccgggatatgtctcttggaaa 543
Query: 1941 atcttaggtgtttataga 1958
||||| |||||||||||
Sbjct: 544 ctcttaagtgtttataga 561
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,122
Number of extensions: 8466
Number of successful extensions: 8466
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8464
Number of HSP's successfully gapped: 2
Length of query: 2080
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2063
Effective length of database: 8,119,229
Effective search space: 16749969427
Effective search space used: 16749969427
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)