BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01285 (UTR included)
(2983 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1778_C1 2533 0.0
>BF14_1778_C1
Length = 1287
Score = 2533 bits (1278), Expect = 0.0
Identities = 1284/1287 (99%)
Strand = Plus / Plus
Query: 1236 tatcccaagcagaaaatacatctctttatccgcaacggtgtcgagtatcatgagtcggag 1295
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tatcccaagcagaaaatacatctctttatccnnnacggtgtcgagtatcatgagtcggag 60
Query: 1296 gtggagaatttctatcaggctcacagtagcgaatattttaccgccaaacggatcaaatcc 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtggagaatttctatcaggctcacagtagcgaatattttaccgccaaacggatcaaatcc 120
Query: 1356 actgaccttgtgggggaggctgaagcgaggaacattgctaaggaccgctgtatcggcagc 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actgaccttgtgggggaggctgaagcgaggaacattgctaaggaccgctgtatcggcagc 180
Query: 1416 gactgtgattatctcttctgcctggacagccacgcccgtgttgaacctgatacacttcat 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gactgtgattatctcttctgcctggacagccacgcccgtgttgaacctgatacacttcat 240
Query: 1476 tacttgctctctaccggatatgacgtcgtcgcccccttactagtacgcagtggacaagct 1535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tacttgctctctaccggatatgacgtcgtcgcccccttactagtacgcagtggacaagct 300
Query: 1536 tggtcaaacttttggggtgctattaactctgttggtttctattcccgttcagctgattat 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggtcaaacttttggggtgctattaactctgttggtttctattcccgttcagctgattat 360
Query: 1596 atggatattgtcaaccgcagcattgaaggtatctggaacgtcccgttcatcaacaactgc 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggatattgtcaaccgcagcattgaaggtatctggaacgtcccgttcatcaacaactgc 420
Query: 1656 taccttatgaacatttccctgttccgcaaaccgtctgccaaacatgttagctatttgaaa 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taccttatgaacatttccctgttccgcaaaccgtctgccaaacatgttagctatttgaaa 480
Query: 1716 gaggacaccgaccctgatatggctttctgcgcttcactcagatctgctggtatcatgatg 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaggacaccgaccctgatatggctttctgcgcttcactcagatctgctggtatcatgatg 540
Query: 1776 tacgtgagcaatgaaaaggaattcggtcatctcgttaattctgaaacgtttgacgtgagc 1835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tacgtgagcaatgaaaaggaattcggtcatctcgttaattctgaaacgtttgacgtgagc 600
Query: 1836 cgcactaaccctgacatttaccaagtgattgataacaagcttgattgggaacaacgttac 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgcactaaccctgacatttaccaagtgattgataacaagcttgattgggaacaacgttac 660
Query: 1896 ctccaccccaagtaccatgaaatcttcgccaacaaagaaaagcaactcatgccctgcccc 1955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctccaccccaagtaccatgaaatcttcgccaacaaagaaaagcaactcatgccctgcccc 720
Query: 1956 gacgtctattggttcccactgatgtcgatgcgcttctgtaaggaatggatcgaagtcatg 2015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gacgtctattggttcccactgatgtcgatgcgcttctgtaaggaatggatcgaagtcatg 780
Query: 2016 gaggcctttggacaatggagcgatggatctaacaatgacaaacgtctagagagtggttac 2075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gaggcctttggacaatggagcgatggatctaacaatgacaaacgtctagagagtggttac 840
Query: 2076 gaagctgttccaactcgtgatattcacatgaaccaggtcggacttgacattcaatggctc 2135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gaagctgttccaactcgtgatattcacatgaaccaggtcggacttgacattcaatggctc 900
Query: 2136 cgaatcctcaaggattacgttcgtccgctgcaggagttagttttcactggatactaccat 2195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cgaatcctcaaggattacgttcgtccgctgcaggagttagttttcactggatactaccat 960
Query: 2196 aacccccccgtgtccgtcatgaacttcgtggtccgttatcgtcctgatgaacagccctct 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aacccccccgtgtccgtcatgaacttcgtggtccgttatcgtcctgatgaacagccctct 1020
Query: 2256 ctacggccgcaccacgactcctcaacttacaccatcaacctggctctgaatactccccac 2315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ctacggccgcaccacgactcctcaacttacaccatcaacctggctctgaatactccccac 1080
Query: 2316 ttggattacgagggtggtggttgtcggttcatccgctacaactgttcggtgaaggacacc 2375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttggattacgagggtggtggttgtcggttcatccgctacaactgttcggtgaaggacacc 1140
Query: 2376 aagcccggttggcttttgatgcaccctggccgtctgacccacttccacgagggtctcctc 2435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aagcccggttggcttttgatgcaccctggccgtctgacccacttccacgagggtctcctc 1200
Query: 2436 gtcaccaagggcacacgttacattatgatctcattcgtggacccgtaaatttatcgctta 2495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gtcaccaagggcacacgttacattatgatctcattcgtggacccgtaaatttatcgctta 1260
Query: 2496 acgcttcaatctatcaattttatcgtc 2522
|||||||||||||||||||||||||||
Sbjct: 1261 acgcttcaatctatcaattttatcgtc 1287
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 295,173
Number of extensions: 9333
Number of successful extensions: 9333
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9333
Number of HSP's successfully gapped: 1
Length of query: 2983
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2965
Effective length of database: 8,109,745
Effective search space: 24045393925
Effective search space used: 24045393925
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)