BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01289 (UTR included)
(2038 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A2G03 1372 0.0
>BF01026A2G03
Length = 702
Score = 1372 bits (692), Expect = 0.0
Identities = 695/696 (99%)
Strand = Plus / Plus
Query: 467 tctgacaggaaacttgttttgatacgtttctaaaatgcccaaagacgatgcagagactac 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tctgacaggaaacttgttttgatacgtttctaaaatgcccaaagacgatgcagagactac 66
Query: 527 agctctcaaaaaggaactaaacgacttgattgcaaaatgcaaggcggaccaagaaaaagg 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 agctctcaaaaaggaactaaacgacttgattgcaaaatgcaaggcggaccaagaaaaagg 126
Query: 587 tgccgatgcgaagctcgctgaaaaatgtggggatatgggcgacgtaccaaaaatacgtct 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tgccgatgcgaagctcgctgaaaaatgtggggatatgggcgacgtaccaaaaatacgtct 186
Query: 647 actggtcaagaagagtttgaagggacatattaataaagtcaattccgtgcactacagcgg 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 actggtcaagaagagtttgaagggacatattaataaagtcaattccgtgcactacagcgg 246
Query: 707 ggattcaagacactgcgttactggatcgcttgatggtaaactaattatttgggatacatg 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggattcaagacactgcgttactggatcgcttgatggtaaactaattatttgggatacatg 306
Query: 767 gagtggtaacaaagttcaagttataccgttaaggtcggcttgggtaatgagcgttgcttt 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gagtggtaacaaagttcaagttataccgttaaggtcggcttgggtaatgagcgttgcttt 366
Query: 827 tgcaccctccggaaactttgtcgcctgtggaggaatggacaacatgtgtactgtgtacga 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgcaccctccggaaactttgtcgcctgtggaggaatggacaacatgtgtactgtgtacga 426
Query: 887 tgtcaacaatcgtgacgctactgggtccgcgaaaatggtgcgtgaactggctggctatga 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 427 tgtcaacaatcgtgacgctactgggtccgcgaaaatggtgcgtgaactggctggctacga 486
Query: 947 gggcttcctgagcagctgccgctttttggatgacacccacatcctcaccggctccggtga 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gggcttcctgagcagctgccgctttttggatgacacccacatcctcaccggctccggtga 546
Query: 1007 tatgaagatatgtgtttgggacttggaagttggtaaaagagaagtggattttaacgctca 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tatgaagatatgtgtttgggacttggaagttggtaaaagagaagtggattttaacgctca 606
Query: 1067 cgctggggatgtggtaactatttcgctagcaccagatatgaaaacattcgtcaccggctc 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cgctggggatgtggtaactatttcgctagcaccagatatgaaaacattcgtcaccggctc 666
Query: 1127 tgtagacagaacttgcaagctttgggatgtgcgctc 1162
||||||||||||||||||||||||||||||||||||
Sbjct: 667 tgtagacagaacttgcaagctttgggatgtgcgctc 702
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 298,863
Number of extensions: 11616
Number of successful extensions: 11616
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11616
Number of HSP's successfully gapped: 1
Length of query: 2038
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2021
Effective length of database: 8,119,229
Effective search space: 16408961809
Effective search space used: 16408961809
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)