BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01303 (UTR included)
(1648 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015A2A01 1310 0.0
BF01038B2F08 101 3e-21
BF01057B2B01 86 2e-16
>BF01015A2A01
Length = 688
Score = 1310 bits (661), Expect = 0.0
Identities = 680/688 (98%)
Strand = Plus / Plus
Query: 499 aaatgagggaatttaaatacgacgttattgaattaattcatgctgtacaagaacgtccat 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatgagggaatttaaatacgacgttattgaattaattcatgctgtacaagaacgtccat 60
Query: 559 gtctttgggataagacgtcagaaatatataaagatcgactagaaagaagagcagcatggg 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtctttgggataagacgtcagaaatatataaagatcgactagaaagaagagcagcatggg 120
Query: 619 aacaagtatttaccttattagaggagaaatacgaggaaatgtcgtcacaagaaaaaagat 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacaagtatttaccttattagaggagaaatacgaggaaatgtcgtcacaagaaaaaagat 180
Query: 679 ttactggggaacatattctgaacaaatggacaaatattcgtgatactttcgttaagtcat 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttactggggaacatattctgaacaaatggacaaatattcgtgatactttcgttaagtcat 240
Query: 739 tgaaatcgaaagctggcagaccgcggaggaaatacctgctttacgatcacctaaaattcc 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaaatcgaaagctggcagaccgcggaggaaatacctgctttacgatcacctaaaattcc 300
Query: 799 ttatcaaagtaacagccaccgaagaagactgcacagaatacaataacgacgaatcctata 858
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 301 ttatcaaagtaacagccaccgaagaagactgcacagaatacaataacgatgaatcctata 360
Query: 859 tttatatgaaacctgaaaaactcagtcctcaagaaccgtctaagaaaagatcaaagaaat 918
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttatatgaaacctgaaaaactaagtcctcaagaaccgtctaagaaaagatcaaagaaat 420
Query: 919 ccgaatacgaggaaccgaaacagaaagaatacgacaaaaatgagatggatttcgttgaag 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccgaatacgaggaaccgaaacagaaagaatacgacaaaaatgagatggatttcgttgaag 480
Query: 979 tggatgaatgtaacgatcctagaataatgaacgaggatgaagcgttcttcgcgtcactcc 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggatgaatgtaacgatcctagaataatgaacgaggatgaagcgttcttcgcgtcactcc 540
Query: 1039 taccctctgtcgtgaagtacaatgaggacgaaagactcgaattccgcatggaagtgttgg 1098
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgccctctgtcgtgaagtacaatgaggacgaaagactcgaattccgcatggaagtgttgg 600
Query: 1099 ccatcatgaaacggataaaggacaaacggaaatggaccaatgacgtgtgactcaggttat 1158
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 601 ccatcatgaaacggatannngacaaacggaaatggaccaatgangtgtgactcaggttat 660
Query: 1159 atagggtgtttgaaatattaaaaactta 1186
||| ||||||||||||||||||||||||
Sbjct: 661 atanggtgtttgaaatattaaaaactta 688
>BF01038B2F08
Length = 786
Score = 101 bits (51), Expect = 3e-21
Identities = 108/125 (86%), Gaps = 4/125 (3%)
Strand = Plus / Minus
Query: 1217 tgttacaagtggcgccctccgtgctccactaattataatata---taatcctcagaatta 1273
||||||||||||||||||||||||| |||||||||| ||| ||||||| ||||||
Sbjct: 736 tgttacaagtggcgccctccgtgctgagctaattataacatactataatccttagaattg 677
Query: 1274 tttttatgactgattataattaattagaatgctgaaccattgtaattttgtaatggcaac 1333
|| ||| |||||||| | |||||||| ||| ||| |||||||||||||| ||||||||||
Sbjct: 676 ttcttacgactgattgttattaattataatactggaccattgtaatttt-taatggcaac 618
Query: 1334 attta 1338
|||||
Sbjct: 617 attta 613
>BF01057B2B01
Length = 555
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 1257 tataatcctcagaattatttttatgactgattataattaattagaatgctgaaccattgt 1316
||||||||| | ||||||||| |||||||||| |||||| ||| || ||||||||||||
Sbjct: 148 tataatccttacaattattttaatgactgattgtaattacttataacactgaaccattgt 89
Query: 1317 aattttgtaatggcaacat 1335
| |||||||||||||||||
Sbjct: 88 agttttgtaatggcaacat 70
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 253,671
Number of extensions: 9676
Number of successful extensions: 9676
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 9674
Number of HSP's successfully gapped: 3
Length of query: 1648
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1631
Effective length of database: 8,119,229
Effective search space: 13242462499
Effective search space used: 13242462499
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)