BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01327 (UTR included)
(1861 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015B2F12 1128 0.0
BF14_501_C1 761 0.0
BF01030A1E09 98 6e-20
>BF01015B2F12
Length = 688
Score = 1128 bits (569), Expect = 0.0
Identities = 572/573 (99%)
Strand = Plus / Plus
Query: 514 aggtgttatcgactcgcaaacggaaggacgcgtccgaggaccagatcaaggtgcaggtgt 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 aggtgttatcgactcgcaaacggaaggacgcgtccgaggaccagatcaaggtgcaggtgt 142
Query: 574 gtgtgttcgtgttcgacctgctgtacctcaacggagaggcgctcgtcagggaagacctgg 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gtgtgttcgtgttcgacctgctgtacctcaacggagaggcgctcgtcagggaagacctgg 202
Query: 634 agaaaaggagggagctgttgaggcagcacttcaatgaggtcgaaggtgaatggcagttcg 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 agaaaaggagggagctgttgaggcagcacttcaatgaggtcgaaggtgaatggcagttcg 262
Query: 694 cggtgagccgtgactgtaccgacgaggaggaggtggctcagttcctgcaggagtctgtga 753
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 263 cggtgagccgtgactgtaccgacgaggaggaggtggctcagtttctgcaggagtctgtga 322
Query: 754 aggcatcctgtgagggtctcatggtgaaggcgctccggggagagaatgcgcgctatgaca 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aggcatcctgtgagggtctcatggtgaaggcgctccggggagagaatgcgcgctatgaca 382
Query: 814 tagccaggaggtcgcacaactggctgaagttaaagaaggactatctggagggcgtgggcg 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tagccaggaggtcgcacaactggctgaagttaaagaaggactatctggagggcgtgggcg 442
Query: 874 actccgtggacgcggtggtgatcggcgcttatcacgggcgggggaagaggacgggcgtgt 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 actccgtggacgcggtggtgatcggcgcttatcacgggcgggggaagaggacgggcgtgt 502
Query: 934 acggcgggttcctgctggcgtgctacgaccccgctcacgaacagtaccagtcgctctgca 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acggcgggttcctgctggcgtgctacgaccccgctcacgaacagtaccagtcgctctgca 562
Query: 994 agataggcaccggcttctccgacgaggacctgcgcacgctcagcgacacgctcgccgaac 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agataggcaccggcttctccgacgaggacctgcgcacgctcagcgacacgctcgccgaac 622
Query: 1054 acgtcgtagacggacccaggagctactacttgt 1086
|||||||||||||||||||||||||||||||||
Sbjct: 623 acgtcgtagacggacccaggagctactacttgt 655
>BF14_501_C1
Length = 1458
Score = 761 bits (384), Expect = 0.0
Identities = 403/408 (98%), Gaps = 1/408 (0%)
Strand = Plus / Minus
Query: 1455 tcagatttaattttgttttatttcgtttttattacatcttacaatacattcttaggacta 1514
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 tcagatttaaatttgttttatttcgtttttattacatcttacaatacattcttaggacta 1381
Query: 1515 tgataaggggaagaaaattcgttcgcgggtcctctccggcgcgcggtcgccgcggtcgcc 1574
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1380 tgataaggggaagaaaattcgttcgcgggtcctctccggcgcgcggtggccgcggtcgcc 1321
Query: 1575 gcgaggccctgagctgatgagcttcgtttattatattttatatacaaccattaattccta 1634
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 gcgaggccctgagttgatgagcttcgtttattatattttatatacaaccattaattccta 1261
Query: 1635 atcgtgcgtcgtgcgatcgaaatgatcgagccaacggtgt-attgttccggttacggaaa 1693
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 1260 atcgtgcgtcgtgcgatcgaagtgatcgagccaacggtgtaattgttccggttacggaaa 1201
Query: 1694 tcgatttaacaatcgatggaaatattctcgcaagatatggcacgaattatagattagtga 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 tcgatttaacaatcgatggaaatattctcgcaagatatggcacgaattatagattagtga 1141
Query: 1754 acagcgacatctgctgcgtacgaactaaactaaacaattgtactaactcgactcgctaag 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 acagcgacatctgctgcgtacgaactaaactaaacaattgtactaactcgactcgctaag 1081
Query: 1814 ggtagggtcctgacggtaaatacatcacattcatcgaactgagcttca 1861
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 ggtagggtcctgacggtaaatacatcacattcatcgaactgagcttca 1033
>BF01030A1E09
Length = 779
Score = 97.6 bits (49), Expect = 6e-20
Identities = 67/72 (93%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 110 tactcaacggttttgaacgcggttttca--gttggattacatataattaggagcattgtc 167
|||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 748 tactcaacggatctgaacgcggttctcacagttggattacatataattaggagcattgtc 689
Query: 168 aaaactttgttt 179
||||||||||||
Sbjct: 688 aaaactttgttt 677
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 181,954
Number of extensions: 3401
Number of successful extensions: 3401
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3398
Number of HSP's successfully gapped: 3
Length of query: 1861
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1844
Effective length of database: 8,119,229
Effective search space: 14971858276
Effective search space used: 14971858276
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)