BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01336 (UTR included)
(1342 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055A2B03 78 4e-14
BF01016B1A11 78 4e-14
BF14_911_C2 78 4e-14
BF01030A2C06 74 6e-13
>BF01055A2B03
Length = 776
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 tatcgagtggtgataactatttgataattaatgcagtagtttttccgtttatcgcgaaca 60
|||||||||||||||||| |||||| || ||| |||||||||||||||||||||||||
Sbjct: 542 tatcgagtggtgataactgtttgatgatcggtgctgtagtttttccgtttatcgcgaaca 601
Query: 61 cacagac 67
||||||
Sbjct: 602 aacagac 608
>BF01016B1A11
Length = 786
Score = 77.8 bits (39), Expect = 4e-14
Identities = 82/96 (85%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 7 gtggtgataactatttgataattaatgcagtagtttttccgtttatcgcgaacacacag- 65
|||||||||||| ||||||||| ||||||||||||||| ||||||||||||| ||||
Sbjct: 509 gtggtgataactgtttgataatcggtgcagtagtttttccttttatcgcgaacagacagt 568
Query: 66 ---actgagggacttagttttataatatgtattgat 98
| ||||||||| ||| ||||||||||||||||
Sbjct: 569 cgtagcgagggactttgttctataatatgtattgat 604
>BF14_911_C2
Length = 1025
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 5 gagtggtgataactatttgataattaatgcagtagtttttccgtttatcgcgaacacaca 64
|||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 245 gagtggtgataactgtttgataatcgctgcagtagtttttccgtttctcgggaacacaca 304
Query: 65 gac 67
|||
Sbjct: 305 gac 307
>BF01030A2C06
Length = 599
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 3 tcgagtggtgataactatttgataattaatgcagtagtttttccgtttatcgcgaacaca 62
|||||||||| ||||| ||||||| || ||||| ||||||||||||||||||||||| |
Sbjct: 479 tcgagtggtggtaactgtttgatatttggtgcagcagtttttccgtttatcgcgaacaga 538
Query: 63 cagac 67
|||||
Sbjct: 539 cagac 543
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 233,193
Number of extensions: 6557
Number of successful extensions: 6557
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6557
Number of HSP's successfully gapped: 4
Length of query: 1342
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1325
Effective length of database: 8,119,229
Effective search space: 10757978425
Effective search space used: 10757978425
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)