BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01357 (UTR included)
(5425 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B1H10 1174 0.0
>BF01043B1H10
Length = 818
Score = 1174 bits (592), Expect = 0.0
Identities = 607/612 (99%)
Strand = Plus / Plus
Query: 3351 aaaaacaaagcttcgatgtaccaaatggcgagatatttagagatgagcgcaaatcaaacg 3410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaacaaagcttcgatgtaccaaatggcgagatatttagagatgagcgcaaatcaaacg 60
Query: 3411 gaaaacgctgttaagatctacataaaatgcggagccataacatccgccattcgcgtggcg 3470
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 gaaaacgctgttaagatctacataaaatgcggagccataacatccgccattcgtgtggcg 120
Query: 3471 gcggaagcgaacgcgtggaacctagtgtggcgagctggttcgtgttcccctcaacacgca 3530
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcggaagcgaacgcgtggaacttagtgtggcgagctggttcgtgttcccctcaacacgca 180
Query: 3531 gtctacgccgcatccatactagagaacgctggacagaacgaacgagcgatagccttgtac 3590
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 gtctacgccgcatccatactagagaacgccggacagaacgaacgagcgatagccttgtac 240
Query: 3591 caaaaagctggcaaaccgcacatgtcactgaagctggccctcagcagcggtgataccgcg 3650
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 caaaaagctggcaaaccgcacatgtcactgaagctggccctcagtagcggtgataccgcg 300
Query: 3651 gccgttatatctgcggctgaatctttgcagcgtgttgaagggtctttggctcgctcgctg 3710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccgttatatctgcggctgaatctttgcagcgtgttgaagggtctttggctcgctcgctg 360
Query: 3711 gcgacccatctgcgacaagcccagagaccagctcatgctgcagctgtactggccactgct 3770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcgacccatctgcgacaagcccagagaccagctcatgctgcagctgtactggccactgct 420
Query: 3771 ggacagtacgaagaggccctagatatagtagaagaatcagaagcgccgctgtcagaggaa 3830
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggacagtacgaagaggctctagatatagtagaagaatcagaagcgccgctgtcagaggaa 480
Query: 3831 ctgagcgagaagttagcggctccggctggaactgacggaagggacgcgttgttgaggaga 3890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgagcgagaagttagcggctccggctggaactgacggaagggacgcgttgttgaggaga 540
Query: 3891 ttagcggatatactgggcaccaggggcttgtaccaccaggccgccaaacgactagcacat 3950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttagcggatatactgggcaccaggggcttgtaccaccaggccgccaaacgactagcacat 600
Query: 3951 atcggagataag 3962
||||||||||||
Sbjct: 601 atcggagataag 612
Score = 1039 bits (524), Expect = 0.0
Identities = 541/548 (98%)
Strand = Plus / Plus
Query: 3960 aagctggccctcagtagcggtgataccgcggccgttatatctgcggctgaatctttgcag 4019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aagctggccctcagtagcggtgataccgcggccgttatatctgcggctgaatctttgcag 330
Query: 4020 cgtgttgaagggtctttggctcgctcgctggcgacccatctgcgacaagcccagcgacca 4079
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 331 cgtgttgaagggtctttggctcgctcgctggcgacccatctgcgacaagcccagagacca 390
Query: 4080 gctcatgctgcagctgtactggccactgctggacagtacgaagaggctctcgatatagta 4139
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 391 gctcatgctgcagctgtactggccactgctggacagtacgaagaggctctagatatagta 450
Query: 4140 gaagaatcagaagcgccgctgtcagaggaactgagcgagaagttagcggctccggctgga 4199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gaagaatcagaagcgccgctgtcagaggaactgagcgagaagttagcggctccggctgga 510
Query: 4200 actgacggaagggacgcgttgttgaggagattagcggatatactgggcaccaggggcttg 4259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 actgacggaagggacgcgttgttgaggagattagcggatatactgggcaccaggggcttg 570
Query: 4260 taccaccaggccgccaaacgactagcacatatcggagataaggccggtgctatgcgctgg 4319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 taccaccaggccgccaaacgactagcacatatcggagataaggccggtgctatgcgctgg 630
Query: 4320 ttgatgcgttctggggactgtgaacgaatcgcaaccttcgcgtcggcgtcccgggaccgt 4379
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 631 ttgatgcgttctggggactgtgaacgcatcgcaaccttcgcgtcggcgtcccgggaccgt 690
Query: 4380 gccgctcagctgatggccgcggacttcctcaggcgacacgcctcatggaagaccagaccc 4439
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 691 gccgctcagctgatggccgcggacttcctcaggcgacacgcctcatggangnnnagaccc 750
Query: 4440 gacctggctcgccatgtcatacacttttatagcaaggcacgcgcatacacaaaacttgcc 4499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gacctggctcgccatgtcatacacttttatagcaaggcacgcgcatacacaaaacttgcc 810
Query: 4500 tcattcta 4507
||||||||
Sbjct: 811 tcattcta 818
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 563,491
Number of extensions: 10829
Number of successful extensions: 10829
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10829
Number of HSP's successfully gapped: 2
Length of query: 5425
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5407
Effective length of database: 8,109,745
Effective search space: 43849391215
Effective search space used: 43849391215
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)