BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01365 (UTR included)
(2215 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049B2D10 319 1e-86
BF01029A1A09 105 3e-22
>BF01049B2D10
Length = 821
Score = 319 bits (161), Expect = 1e-86
Identities = 164/165 (99%)
Strand = Plus / Plus
Query: 1137 ctggattacaagattctgagacacgctatgacttccattgagatatcaacttgtgtggtg 1196
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctggattataagattctgagacacgctatgacttccattgagatatcaacttgtgtggtg 469
Query: 1197 ttccaagaagtcaagactgatggtgtcttggaagctaagagtcaaatctggttttcgaga 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttccaagaagtcaagactgatggtgtcttggaagctaagagtcaaatctggttttcgaga 529
Query: 1257 gatggtaacgaaatgcccatgttcggttttgttgaaaacaaacag 1301
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gatggtaacgaaatgcccatgttcggttttgttgaaaacaaacag 574
Score = 91.7 bits (46), Expect = 4e-18
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 1085 gtggcccctgggtatagttctttacggggttgatgacgaactaggt 1130
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gtggcccctgggtatagttctttacggggttgatgacgaactaggt 58
>BF01029A1A09
Length = 732
Score = 105 bits (53), Expect = 3e-22
Identities = 74/80 (92%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 138 ggaaaactacgaaacttacttatatgtatattataat--aagaattacatattaaaactc 195
||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||
Sbjct: 84 ggaaaactacgaaacatacttatatgtatattataataaaaaaattacatattaaaactt 25
Query: 196 ataacctataccttagacta 215
||||||||||||| ||||||
Sbjct: 24 ataacctatacctaagacta 5
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 286,376
Number of extensions: 6545
Number of successful extensions: 6545
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6544
Number of HSP's successfully gapped: 3
Length of query: 2215
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2198
Effective length of database: 8,119,229
Effective search space: 17846065342
Effective search space used: 17846065342
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)