BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01374 (UTR included)
(3904 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B2D02 1298 0.0
>BF01028B2D02
Length = 720
Score = 1298 bits (655), Expect = 0.0
Identities = 710/730 (97%), Gaps = 10/730 (1%)
Strand = Plus / Plus
Query: 2848 agtatgtccgaggtctgatagcgttcctcggcttctattctgcacatttcggagccgatc 2907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtatgtccgaggtctgatagcgttcctcggcttctattctgcacatttcggagccgatc 60
Query: 2908 ctctgatagagctcgtggattccgtacaggctaatatgttcgctatgtacgtggagaggg 2967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctctgatagagctcgtggattccgtacaggctaatatgttcgctatgtacgtggagaggg 120
Query: 2968 ttttggtaccggatgtgcagaaggtttccggggctctggaacggaaggcggcggctgtcg 3027
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 ttttggtaccggatgtgcagaaggtttccggggctctggaacgcaaggcggcggctgtcg 180
Query: 3028 ggtgcgtgaagctgctgtgtcacagcgcacacttccgggaggggagattggctggtctgt 3087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtgcgtgaagctgctgtgtcacagcgcacacttccgggaggggagattggctggtctgt 240
Query: 3088 ggacgaatctgttgcaggctctcatcgcgttgttcgagttgccgcccgacgaaacccaac 3147
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 ggacgaatctgttgcaggccctcatcgcgttgttcgagttgccgccagacgaaacccaac 300
Query: 3148 tgcctgatgaccacttcatagaggtcgacgacaccccgggctaccagccggtgtacgcac 3207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcctgatgaccacttcatagaggtcgacgacaccccgggctaccagccggtgtacgcac 360
Query: 3208 agctagcctgcgccaagaccggaagcgatgatcccttggctgccatagaagatccgaaac 3267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agctagcctgcgccaagaccggaagcgatgatcccttggctgccatagaagatccgaaac 420
Query: 3268 gttacctggcggagagtctagcggccatgtcgcgggacttccccggcgtcctgccgccga 3327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttacctggcggagagtctagcggccatgtcgcgggacttccccggcgtcctgccgccga 480
Query: 3328 gggtcggttcccttgacgaacctcatcgcggcgtgctgcagaactacctccagagttacg 3387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggtcggttcccttgacgaacctcatcgcggcgtgctgcagaactacctccagagttacg 540
Query: 3388 gggtagcgatctgctgataagtcacagttccgtacatttctatatgaactttcatagaac 3447
|||||||||||||||||| ||| |||||| ||| ||||||||||||||||
Sbjct: 541 gggtagcgatctgctgatgtgtc----------acatttgtatctgaactttcatagaac 590
Query: 3448 agtgatcaaggtcacacagaaactgtgtaatataattgatgtttaaattatgatgtgggc 3507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 agtgatcaaggtcacacagaaactgtgtaatataattgatgtttaaattatgatgtgggc 650
Query: 3508 cgtctcaatgtaacgtatatctgactcattgaactctaaccgcgtctccgtaaccaaacc 3567
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 651 cgtctcaatgtatcgtatatctgactcattgaactctaaccgcgtctccgtaacccaatc 710
Query: 3568 agacgccgcg 3577
||||||||||
Sbjct: 711 agacgccgcg 720
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 374,529
Number of extensions: 8234
Number of successful extensions: 8234
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8234
Number of HSP's successfully gapped: 2
Length of query: 3904
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3886
Effective length of database: 8,109,745
Effective search space: 31514469070
Effective search space used: 31514469070
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)