BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01381 (UTR included)
(3292 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3408_C1 1566 0.0
BF01014B2D12 70 2e-11
>BF14_3408_C1
Length = 828
Score = 1566 bits (790), Expect = 0.0
Identities = 817/827 (98%), Gaps = 6/827 (0%)
Strand = Plus / Plus
Query: 2228 cagcgacaacggcaacgagaagtacgtgcacttcaggcagaaccgcgagccggtgttcgt 2287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cagcgacaacggcaacgagaagtacgtgcacttcaggcagaaccgcgagccggtgttcgt 61
Query: 2288 ggactgcgcgccgcccgagccgccgccgcccgtgcagtaccagatcgagccgcggcacca 2347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggactgcgcgccgcccgagccgccgccgcccgtgcagtaccagatcgagccgcggcacca 121
Query: 2348 cgtgctgtacgtgagcgtgggcccgcaggtcaacacgtaccgcttcccgcgcgactcggc 2407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgtgctgtacgtgagcgtgggcccgcaggtcaacacgtaccgcttcccgcgcgactcggc 181
Query: 2408 ggacctggagcgccaggtgtgcctcagcctggcgcccgcgcacgtggactccagctcgct 2467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggacctggagcgccaggtgtgcctcagcctggcgcccgcgcacgtggactccagctcgct 241
Query: 2468 ggtcacggacttcgcgatccggcgcttcgggcgcgcggacggcgaggacgtcaacatcat 2527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggtcacggacttcgcgatccggcgcttcgggcgcgcggacggcgaggacgtcaacatcat 301
Query: 2528 ccacataggacccaacgggcccatgctggtggggcagagcgccggctcgcggcccgaccg 2587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ccacataggacccaacgggcccatgctggtggggcagagcgccggctcgcggcccgaccg 361
Query: 2588 ctccaacctgcgcctgctgtccgtcacgggctaccggaacatcacggaccgcagcctctc 2647
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 362 ctccaacctgcgcctgctgtccgtcacgggctaccggaacatcacggaccgaagcctctc 421
Query: 2648 gcacctggcctccgccgcgccgcgcctcgcgtcgctggacttccgcgagaccaacgtcag 2707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gcacctggcctccgccgcgccgcgcctcgcgtcgctggacttccgcgagaccaacgtcag 481
Query: 2708 cgaggccggcgccaggagcttcctcgccctgcgccccgactgcgagctggtctacagcgc 2767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cgaggccggcgccaggagcttcctcgccctgcgccccgactgcgagctggtctacagcgc 541
Query: 2768 cttcgtcgacgacaaggacaactagcctccgccgccgaccggaccgctcgcggatctcat 2827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cttcgtcgacgacaaggacaactagcctccgccgccgaccggaccgctcgcggatctcat 601
Query: 2828 ttcggtttagcgcgtcgagtctcgacgtcatttagccagactcc------gactcagact 2881
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 602 ttcggtttagcgcgtcgagtctcgacgtcatttagtcagactccaactcagactcagact 661
Query: 2882 cagactgtgagactggcgggactcggcgtttatttattacaaatgttcatcttccaaaga 2941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cagactgtgagactggcgggactcggcgtttatttattacaaatgttcatcttccaaaga 721
Query: 2942 agaaacgtgttctagtgaatagtcacagcgttgcatttacttctccgtcgcgttagttcg 3001
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 agnancgtgttctagtgaatagtcacagcgttgcatttacttctccgtcgcgttagttcg 781
Query: 3002 tgtcgtcaccttccattctccagccgcgccttctccgtcccgcgact 3048
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tgtcgtcaccttccattctccagccgcgccttctccgtcccgcgact 828
>BF01014B2D12
Length = 734
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 3218 tgtgtgtgtgtgagtgtgtgtgagtgtgtctgtgtgtatgtgtgtgtgttt 3268
|||||||||||| ||||||||| |||||| ||||||| |||||||||||||
Sbjct: 116 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgttt 66
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 3218 tgtgtgtgtgtgagtgtgtgtgagtgtgtctgtgtgtatgtgtgtgtgttt 3268
|||||||||||| ||||||||| |||||| ||||||| |||||||||||||
Sbjct: 136 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttt 86
Score = 67.9 bits (34), Expect = 1e-10
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 3218 tgtgtgtgtgtgagtgtgtgtgagtgtgtctgtgtgtatgtgtgtgtgtttatttgtg 3275
|||||||||||| ||||||||| |||||| ||||||| ||||||||||| | ||||||
Sbjct: 140 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtg 83
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 291,681
Number of extensions: 11937
Number of successful extensions: 11937
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 11932
Number of HSP's successfully gapped: 5
Length of query: 3292
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3274
Effective length of database: 8,109,745
Effective search space: 26551305130
Effective search space used: 26551305130
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)