BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01385 (UTR included)
(3352 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2G03 1398 0.0
>BF01054B2G03
Length = 794
Score = 1398 bits (705), Expect = 0.0
Identities = 735/745 (98%)
Strand = Plus / Plus
Query: 2012 cgatgacttcgactcattactggtcgagcaggagagtgatggacccaacgaactgaacag 2071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 cgatgacttcgactcattactggtcgagcaggagagtgatggacccaacgaactgaacag 109
Query: 2072 attacgagatgacttacatgttagaggcgacgactcgagtaacgagggtgtagggaataa 2131
||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||
Sbjct: 110 attacgagatgacttacatgttagaggtgacgactcgagcaacgagggtgtagggactaa 169
Query: 2132 tataagcaatgactcgataggtacagatacgaaaagcaaagacaacactaatcatacagg 2191
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tataagcaatgactcgatagctacagatacgaaaagcaaagacaacactaatcatacagg 229
Query: 2192 cccgggaagtgagctgagtcaccatcaagctactgaggacctgaggcgatgtgatgtgga 2251
||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 230 tccgggaagtgacctgagtcaccatcaagctactgaggacccgaggcgatgtgatgtgga 289
Query: 2252 cagagacagtaggaatgaagctactaccgacagctctgtggattgtacagataataatac 2311
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 290 cagagacagtaggaatgaagctactacagacagctctgtggattgtacagataataatat 349
Query: 2312 agtgtgtggcggtaatgttagtgataggctcgtcaatgataatcacacgcggactgatga 2371
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 350 agtgtgtggcggtaatgttagtgatagactcgtcaatgataatcacacgcggactgatga 409
Query: 2372 taatgatacgacagctcatgataatgatacgagatataatgacaaactagttaatgataa 2431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 taatgatacgacagctcatgataatgatacgagatataatgacaaactagttaatgataa 469
Query: 2432 tgacacgcgaagtaaggacacaggagataatgatacgctacataatgataatgatatgtc 2491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tgacacgcgaagtaaggacacaggagataatgatacgctacataatgataatgatatgtc 529
Query: 2492 attgaatggtaacgtcacacgagatgatcacacaagggataatggtgcatcagttaatga 2551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 attgaatggtaacgtcacacgagatgatcacacaagggataatggtgcatcagttaatga 589
Query: 2552 taatgacacgccagttaacgataatgatacgatagaagatgaaaatgcagacattactat 2611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 taatgacacgccagttaacgataatgatacgatagaagatgaaaatgcagacattactat 649
Query: 2612 tgaaaaggttgaggaaaaagtccttagtaacaatgaggttagtatcaatgatgatgaaga 2671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tgaaaaggttgaggaaaaagtccttagtaacaatgaggttagtatcaatgatgatgaaga 709
Query: 2672 agaatataaagacgaacaaactgatttagatgatggagaggtgaccgaagacatagatga 2731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 agaatataaagacgaacaaactgatttagatgatggagaggtgaccgaagacatagatga 769
Query: 2732 ccagaaactgatggaagctctggat 2756
|||||||||||||||||||||||||
Sbjct: 770 ccagaaactgatggaagctctggat 794
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 355,438
Number of extensions: 7532
Number of successful extensions: 7532
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7510
Number of HSP's successfully gapped: 1
Length of query: 3352
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3334
Effective length of database: 8,109,745
Effective search space: 27037889830
Effective search space used: 27037889830
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)