BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01398 (UTR included)
(2734 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A2E07 1403 0.0
>BF01017A2E07
Length = 721
Score = 1403 bits (708), Expect = 0.0
Identities = 717/720 (99%)
Strand = Plus / Plus
Query: 959 ctcatacatgcctctgatcagaccgtcgctggaattcactctatactattgtttcactga 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcatacatgcctctgatcagaccgtcgctggaattcactctatactattgtttcactga 60
Query: 1019 agtcggaatgtctttgacatacgaaaggttcactatacagtgtttgaatatactgaaagg 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtcggaatgtctttgacatacgaaaggttcactatacagtgtttgaatatactgaaagg 120
Query: 1079 catcctgcagtgcgtcgagtacaaactacctaaagggaacgaaccggtcaaagagccaat 1138
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 catcctgcagtgcgtcgagtacaaactacctaaagggaacgaaccggttaaagagccaat 180
Query: 1139 ccgagctcaagcccaccagctcaagtggcaggtgttggatcagcggacagtgtgccacat 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgagctcaagcccaccagctcaagtggcaggtgttggatcagcggacagtgtgccacat 240
Query: 1199 gtgccgacacctagtcacacactatttcctactcacggctgacgacctcgcgctttggga 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgccgacacctagtcacacactatttcctactcacggctgacgacctcgcgctttggga 300
Query: 1259 cgcggagccggagagcttcgcaaccgacgaggccggcgaatcgtggaagtacagccttaa 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgcggagccggagagcttcgcaaccgacgaggccggcgaatcgtggaagtacagccttaa 360
Query: 1319 gccgtgcaccgaggcggtgttcctggaactgttccacgagtaccggtcggtgctggcgcc 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gccgtgcaccgaggcggtgttcctggaactgttccacgagtaccggtcggtgctggcgcc 420
Query: 1379 cgagctggtcagaatgttggcgtccctgcaagaaacacaagtctccccggacgacctgcc 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgagctggtcagaatgttggcgtccctgcaagaaacacaagtctccccggacgacctgcc 480
Query: 1439 cgccatattgaaaaaggacgccatttataacgctgtcggactggcagctttcgacttata 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgccatattgaaaaaggacgccatttataacgctgtcggactggcagctttcgacttata 540
Query: 1499 cgatgatgtcgactttgacgagtggttcacgaacgtgctgagcaaggaattgaagataga 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgatgatgtcgactttgacgagtggttcacgaacgtgctgagcaaggaattgaagataga 600
Query: 1559 agacaacaattacagaataatacggaggagagtttgtcagttaataagtcattggtgtgg 1618
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 601 agacaacaattacagaataatacggaggagagtctgtcagttaataagtcattggtgtgg 660
Query: 1619 agtgcgagcgtctcagtcgctccggccggcgatgtacacggctctgctggaaccgctcac 1678
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 661 agtgcgagcgtctcagtcgctccggccggcgatgtacaccgctctgctggaaccgctcac 720
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,762
Number of extensions: 6813
Number of successful extensions: 6813
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6813
Number of HSP's successfully gapped: 1
Length of query: 2734
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2717
Effective length of database: 8,119,229
Effective search space: 22059945193
Effective search space used: 22059945193
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)