BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01404 (UTR included)
(1795 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3008_C1 1877 0.0
>BF14_3008_C1
Length = 968
Score = 1877 bits (947), Expect = 0.0
Identities = 962/967 (99%)
Strand = Plus / Plus
Query: 496 cagacatgtcgtctgaaatgcgactggttcaggaaatagaaaagtttgagtgtttataca 555
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2 cagacatgtcgtctgaaatgcgactggttcaggaaatataaaagtttgagtgtttataca 61
Query: 556 acagctgcctaccagaatataatcggaaggatttaacagaggaggcgtgggcacaagtgt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acagctgcctaccagaatataatcggaaggatttaacagaggaggcgtgggcacaagtgt 121
Query: 616 cctatagcactgatttaacagttgctgaatgtaaagagaaatggagaaatattagaagtt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cctatagcactgatttaacagttgctgaatgtaaagagaaatggagaaatattagaagtt 181
Query: 676 cacttctgagaaatcttaagccaagtgaaaagagtcgaaaaccatactatttaatgccgt 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cacttctgagaaatcttaagccaagtgaaaagagtcgaaaaccatactatttaatgccgt 241
Query: 736 ttcttcatttcgtcatgccattcttaaaaccaattaacaaccctgaaaccaaagacgaac 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttcttcatttcgtcatgccattcttaaaaccaattaacaaccctgaaaccaaagacgaac 301
Query: 796 ttaatttacttcgaacagcaacaaaggagccggatatatatttatgtactgtgaaatcag 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttaatttacttcgaacagcaacaaaggagccggatatatatttatgtactgtgaaatcag 361
Query: 856 aagatgagtgtcaattaatgtgtgacactcagtcattcatcaatacaacagtcatgtctg 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aagatgagtgtcaattaatgtgtgacactcagtcattcatcaatacaacagtcatgtctg 421
Query: 916 atgacgaaacacaaagcgatccattactgtcccaatcgatctcgttgcctcaaaagagaa 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atgacgaaacacaaagcgatccattactgtcccaatcgatctcgttgcctcaaaagagaa 481
Query: 976 ggaacagagaaagtacatacggtgtgacgaataagagacttgctcaaaaagaaatttata 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggaacagagaaagtacatacggtgtgacgaataagagacttgctcaaaaagaaatttata 541
Query: 1036 ccgaaatgagtagttcaatgtcaacaatcgagcccccgaggactagtaacgagtcaatga 1095
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 542 ccgaaatgagtagttcaatgtcaacaatcgaacccccgaggactagtaacgagtcaatga 601
Query: 1096 gatatttcttattaagtctcttacctgaattagaaacaatgtcagaagaacaaatacgac 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gatatttcttattaagtctcttacctgaattagaaacaatgtcagaagaacaaatacgac 661
Query: 1156 aattcaaaatcaaaacgatgatggccattgataacataaagtctaatgttgacaaagaaa 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aattcaaaatcaaaacgatgatggccattgataacataaagtctaatgttgacaaagaaa 721
Query: 1216 ctgctaattttcaattgaatacggagcgccttcaaaagaaactcatcaatttactcataa 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ctgctaattttcaattgaatacggagcgccttcaaaagaaactcatcaatttactcataa 781
Query: 1276 aaaaacttgccagaaactgattatactatatttattattgtagttaagtataaatcttat 1335
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 aaaaacttgccaaaaactgattatactatatttattattgtagttaagtataaatcttat 841
Query: 1336 acattaaaattataagaaaagtgcatagtttttctatcctattataatgaatatcttcca 1395
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 842 acattaaaattataagaaaagtgtatagtttttctatcctattataatgaatatcttcca 901
Query: 1396 acatattttctatcagaactacttttttaaattatattatgatatttaaatattttgact 1455
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 acatattttctatccgaactacttttttaaattatattatgatatttaaatattttgact 961
Query: 1456 gtttctg 1462
|||||||
Sbjct: 962 gtttctg 968
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,237
Number of extensions: 7761
Number of successful extensions: 7761
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7761
Number of HSP's successfully gapped: 1
Length of query: 1795
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1778
Effective length of database: 8,119,229
Effective search space: 14435989162
Effective search space used: 14435989162
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)