BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01423 (UTR included)
(2935 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009B2E12 1485 0.0
>BF01009B2E12
Length = 815
Score = 1485 bits (749), Expect = 0.0
Identities = 761/766 (99%)
Strand = Plus / Plus
Query: 1940 acgtgctgccttaaccagcgtcactgcagtacgaagcaaccttaatatgaaagaaaaaat 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 acgtgctgccttaaccagcgtcactgcagtacgaagcaaccttaatatgaaagaaaaaat 109
Query: 2000 cttcgtcggtctagcgtggatggctaaagctacagttcaggctgctttagcgccggttgc 2059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 cttcgtcggtctagcgtggatggctaaagctacagttcaggctgctttagcgccggttgc 169
Query: 2060 acttgacgaagtacgtaaaatgactggtagtgaggaacatatagagcagttagtaaaata 2119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 acttgacgaagtacgtaaaatgactggtagtgaggaacatatagagcagttagtaaaata 229
Query: 2120 tgctgaaattgtaataaacgtctgcatcatgtcaattgtcataacagcacctctaggagc 2179
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tgctgaaatcgtaatcaacgtctgcatcatgtcaattgtcataacagcacctctaggagc 289
Query: 2180 aattgtaataacaatcaccggtcctagattactctctaagacaacgaagccgcctgtatt 2239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aattgtaataacaatcaccggtcctagattactctctaagacaacgaagccgcctgtatt 349
Query: 2240 agaaggctggagacgttcacacaggccatcgattcgtgatatatctatcatagatgagga 2299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agaaggctggagacgttcacacaggccatcgattcgtgatatatctatcatagatgagga 409
Query: 2300 agaggtagctgaaagggatgcagaggcggatgccgatgcacccaattcacccccagtgtc 2359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agaggtagctgaaagggatgcagaggcggatgccgatgcacccaattcacccccagtgtc 469
Query: 2360 acccgtaccaacgatatctccgaacgcatatagcacaccaaaccctatcactgtacagcc 2419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acccgtaccaacgatatctccgaacgcatatagcacaccaaaccctatcactgtacagcc 529
Query: 2420 aaatcatcgaacatagattgttttaaaacctaacagtgcattactttttaaaagtaatgg 2479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aaatcatcgaacatagattgttttaaaacctaacagtgcattactttttaaaagtaatgg 589
Query: 2480 tgtccaattttcataatttttatttcatgacgctaatttattcatatacgaacttagtag 2539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tgtccaattttcataatttttatttcatgacgctaatttattcatatacgaacttagtag 649
Query: 2540 tcacattttttttatattatataagagtgttgtgaaacattgtatgatgaatctatattc 2599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tcacattttttttatattatataagagtgttgtgaaacattgtatgatgaatctatattc 709
Query: 2600 gtaatatatatttttcagaaattattaagagcttttcgaaggttataagtttcgcataaa 2659
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 710 gtaatatatatttttcagaaattattaagagcttttcgannnttataagtttcgcataaa 769
Query: 2660 atgatgtaaataatggcgttcgtattagtttgtaacattaaattat 2705
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 atgatgtaaataatggcgttcgtattagtttgtaacattaaattat 815
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 331,144
Number of extensions: 6773
Number of successful extensions: 6773
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6773
Number of HSP's successfully gapped: 1
Length of query: 2935
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2917
Effective length of database: 8,109,745
Effective search space: 23656126165
Effective search space used: 23656126165
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)