BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01435 (UTR included)
(1636 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A2B09 396 e-110
BF01023A2A12 98 5e-20
BF01056B1D02 90 1e-17
BF01037B1H08 88 5e-17
>BF01054A2B09
Length = 247
Score = 396 bits (200), Expect = e-110
Identities = 212/216 (98%)
Strand = Plus / Plus
Query: 980 agaacgtattcaaacatccatggaacgtgactgtttcatgtcaccaatagaagcaaagag 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 agaacgtattcaaacatccatggaacgtgactgtttcatgtcaccaatagaagcaaagag 64
Query: 1040 ttttggcttgatcgataatgtgttggaacatccgccgtctcatgtggtggaaggtgataa 1099
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 65 ttttggcttgatcgataatgtgttggaacatccaccgtctcatgtggtagaaggtgataa 124
Query: 1100 tgtttcatcaaccccagtgaacaccacaactacttagtgattattgaagcatgccgataa 1159
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 125 tgtttcatcaaccccagtgaacaccacaactacttagtgattattgaaacatgccgatta 184
Query: 1160 ctgttatgacttaataaatatacacaagttacatta 1195
||||||||||||||||||||||||||||||||||||
Sbjct: 185 ctgttatgacttaataaatatacacaagttacatta 220
>BF01023A2A12
Length = 723
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 1528 gggttcaaacctggcaagtaccaatatgatcttttcggagtcatatgtactttctaaaag 1587
||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||||| ||
Sbjct: 100 gggttgaaacctggcaagtaccaatgtgatcttttccgagtcacatgtactttctaacag 159
Query: 1588 tatttacacacca 1600
|||||| ||||||
Sbjct: 160 tatttagacacca 172
>BF01056B1D02
Length = 778
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 1528 gggttcaaacctggcaagtaccaatatgatcttttcggagtcatatgtactttctaa 1584
||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 505 gggttgaaacctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaa 561
>BF01037B1H08
Length = 758
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 1534 aaacctggcaagtaccaatatgatcttttcggagtcatatgtactttctaaaagtattta 1593
||||||||||||||||||| |||||||||| |||||||||||||||||||| | ||||||
Sbjct: 127 aaacctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagaatattta 186
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 210,142
Number of extensions: 4336
Number of successful extensions: 4336
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 4336
Number of HSP's successfully gapped: 4
Length of query: 1636
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1619
Effective length of database: 8,119,229
Effective search space: 13145031751
Effective search space used: 13145031751
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)