BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01441 (UTR included)
(1567 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2D01 1132 0.0
BF01021A2F10 101 3e-21
BF01025A1H05 98 5e-20
BF14_1341_C1 96 2e-19
BF01038A2H08 86 2e-16
BF14_433_C1 74 7e-13
BF01044B2C02 70 1e-11
BF01010B2F01 70 1e-11
>BF01047B2D01
Length = 870
Score = 1132 bits (571), Expect = 0.0
Identities = 583/587 (99%)
Strand = Plus / Plus
Query: 431 gtcgtgtcccgtgagcgtcgcgacgaacgcgcgcgaaaaaaccaaaacggccggcaacga 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcgtgtcccgtgagcgtcgcgacgaacgcgcgcgaaaaaaccaaaacggccggcaacga 60
Query: 491 gactacagacatggtctccgtgggcgcgtggaggcgtcgcactcccgacgactgtgaaga 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gactacagacatggtctccgtgggcgcgtggaggcgtcgcactcccgacgactgtgaaga 120
Query: 551 caggtcggaacccggcgcctccagctctggagtcccgcgggcgccgccgaactgcgcccg 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caggtcggaacccggcgcctccagctctggagtcccgcgggcgccgccgaactgcgcccg 180
Query: 611 ctgccgcaaccacaggctgaagatcgagctgaaaggccacaagcgctattgcaagtaccg 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgccgcaaccacaggctgaagatcgagctgaaaggccacaagcgctattgcaagtaccg 240
Query: 671 ctactgtacttgtgagaagtgccgtctcaccgccgacaggcagagggttatggctctgca 730
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 241 ctactgtacttgtgagaagtgccgtctcaccgccgacaggcagagggttatggccctgca 300
Query: 731 aacggcgttgcggcgagcccaagcgcaggacgaagcgcgggctcgggctctggagacggg 790
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacagcgctgcggcgagcccaagcgcaggacgaagcgcgggctcgggctctggagacggg 360
Query: 791 aattcagccgccagggatagaattggacaggccggagcctccgacagtgaaggctcctag 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aattcagccgccagggatagaattggacaggccggagcctccgacagtgaaggctcctag 420
Query: 851 gagtcccgtggtgccgccaccggctgctattgaccgtcgatcgctgggctcagccagctg 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagtcccgtggtgccgccaccggctgctattgaccgtcgatcgctgggctcagccagctg 480
Query: 911 tgattcaattcccgaatcacctccgggaatgtcgccgtattcagctcctccggcgtccgc 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgattcaattcccgaatcacctccgggaatgtcgccgtattcagctcctccggcgtccgc 540
Query: 971 gcctccacagccgaccatgccgccgctactgccgccacagcaaccag 1017
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcctccacagccgaccatgccgccgctactgccgccacagcaaccag 587
>BF01021A2F10
Length = 792
Score = 101 bits (51), Expect = 3e-21
Identities = 51/51 (100%)
Strand = Plus / Minus
Query: 1494 aggctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaa 1544
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 aggctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaa 47
>BF01025A1H05
Length = 756
Score = 97.6 bits (49), Expect = 5e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 1493 aaggctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaaa 1545
||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 297 aaggctcaaaaggactcgtatccagagccctaaaaacatttacaaaaaaaaaa 245
>BF14_1341_C1
Length = 1009
Score = 95.6 bits (48), Expect = 2e-19
Identities = 55/56 (98%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 1491 ataaggctcaaaaggactcgtatccagagccgt-aaaaacatttacaaaaaaaaaa 1545
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 940 ataaggctcaaaaggactcgtatccagagccgtaaaaaacatttacaaaaaaaaaa 995
>BF01038A2H08
Length = 781
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 1497 ctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaa 1543
|||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 525 ctcaaaaggactcgtatccagagccgtaaaaatatttacaaaaaaaa 479
>BF14_433_C1
Length = 2144
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 1501 aaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaaa 1545
||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 1626 aaaggactcgtatccagagccgtaataacatttgcaaaaaaaaaa 1582
>BF01044B2C02
Length = 774
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 1501 aaaggactcgtatccagagccgtaaaaacatttacaaaaaaaa 1543
|||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 102 aaagtactcgtatccagagccgtaaaagcatttacaaaaaaaa 144
>BF01010B2F01
Length = 839
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 1501 aaaggactcgtatccagagccgtaaaaacatttacaaaaaaaa 1543
||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 553 aaaggactcgtattcagagccgtaaaaacatttacaataaaaa 511
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 254,067
Number of extensions: 9113
Number of successful extensions: 9113
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 9112
Number of HSP's successfully gapped: 8
Length of query: 1567
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1550
Effective length of database: 8,119,229
Effective search space: 12584804950
Effective search space used: 12584804950
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)