BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01482 (UTR included)
(3917 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050A2D09 1477 0.0
BF01053B2F04 1475 0.0
BF01035X1G04 476 e-133
>BF01050A2D09
Length = 773
Score = 1477 bits (745), Expect = 0.0
Identities = 765/773 (98%)
Strand = Plus / Plus
Query: 653 gttcctggcctccgaggaggataacaagaaaggcatctggctggaggcgactcgcagtct 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttcctggcctccgaggaggataacaagaaaggcatctggctggaggcgactcgcagtct 60
Query: 713 ggactattacatgctgaggaacggggacctgctggagtacaacaagaagaccaggaacct 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggactattacatgctgaggaacggggacctgctggagtacaacaagaagaccaggaacct 120
Query: 773 cagggtccggatgttggacggcacggtcaagactctgctggtggacgacagtcagatagt 832
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 121 cagggtccggatgttggacggcacggtcaagactctgctggtggatgacagtcagatagt 180
Query: 833 ggccaacctgatggtggtgatctgcaccaagataggcatcaccaactacgacgagtacgg 892
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agccaacctgatggtggtgatctgcaccaagataggcatcaccaactacgacgagtacgg 240
Query: 893 cctggtcagggaggaggtgaaggaggacgccgacccttgcgaaagacccaactacggcac 952
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241 cctggtcagggaggaggtgaaggaggacgccgacccttgcgagagacccaactacggcac 300
Query: 953 cctcacgctgaagaggagacatcatgagaaggagagggacgccaagatggaacagctcag 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctcacgctgaagaggagacatcatgagaaggagagggacgccaagatggaacagctcag 360
Query: 1013 gaagaaactcaggactgacgatgaagtaaactgggtggagccgtccaagactctccgcga 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagaaactcaggactgacgatgaagtaaactgggtggagccgtccaagactctccgcga 420
Query: 1073 gcaaggcatcgagaccagcgagacgctgctgcttcgtcggagactgttcttctccgaccg 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcaaggcatcgagaccagcgagacgctgctgcttcgtcggagactgttcttctccgaccg 480
Query: 1133 gaacgtggactctcgcgaccccgtgcagctcactctgctgtacgtgcaggcccgggacgc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaacgtggactctcgcgaccccgtgcagctcactctgctgtacgtgcaggcccgggacgc 540
Query: 1193 catcctggccggcacacaccccatcacacaggacaaagcgtgcgagttcgcgggtattca 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catcctggccggcacacaccccatcacacaggacaaagcgtgcgagttcgcgggtattca 600
Query: 1253 gtgccagatacagttcggagatcacaaggaagacaaacatacgcccggatttttagacct 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgccagatacagttcggagatcacaaggaagacaaacatacgcccggatttttagacct 660
Query: 1313 gaaggagttcctgccagcgtcttacgtgaaagtgaagggcatcgagaagaaggtgttccg 1372
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 661 gaaggagttcctgccagcgtcttacgtgaaggtgaagggcatcgagaagnnnntgttccg 720
Query: 1373 cgaacatcgcaagcacgccggcctcagcgagctggacgccaaggtgctctaca 1425
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgaacatcgcaagcacgccggcctcagcgagctggacgccaaggtgctctaca 773
>BF01053B2F04
Length = 787
Score = 1475 bits (744), Expect = 0.0
Identities = 771/779 (98%), Gaps = 2/779 (0%)
Strand = Plus / Plus
Query: 1653 gaccagtactactcggtgcagacgacggaggccgaacagatcctgcaggtgatcgcgggc 1712
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gaccagtactact--gtgcagacgacggaggccgaacagatcctgcaggtgatcgcgggc 68
Query: 1713 tacatcgacatcatcgtgaggaggaggcgggccagggaccatctcggcctggagggagac 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tacatcgacatcatcgtgaggaggaggcgggccagggaccatctcggcctggagggagac 128
Query: 1773 gagggatccgccatgttggaagacagcgtcgcgccgtccaaggctaacatcatccaacac 1832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gagggatccgccatgttggaagacagcgtcgcgccgtccaaggctaacatcatccaacac 188
Query: 1833 gacaccttcaagtcggccaagcccaatcaagaatcagtggccaagccggccgtcctcaga 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gacaccttcaagtcggccaagcccaatcaagaatcagtggccaagccggccgtcctcaga 248
Query: 1893 cctggagcggaaggggccaagccgttctcggtggcgcacgtgacgggggcccagcagacc 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cctggagcggaaggggccaagccgttctcggtggcgcacgtgacgggggcccagcagacc 308
Query: 1953 acgctctcggggagggtcgtcaccggacacgcgccgccagctgcgacgcaggttcagcaa 2012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 acgctctcggggagggtcgtcaccggacacgcgccgccagctgcgacgcaggttcagcaa 368
Query: 2013 acaaaaatcacttctatactgacggagccgcagagggcgttgttgtctaccatcacgagc 2072
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 369 acaaaaatcacttctatactgacggaaccgcagagggcgttgttgtctaccatcacgagc 428
Query: 2073 ggcaaggagatcatcaagcagacggaggccgggctcaccaggacgtccttggagcccccg 2132
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggcaaagagatcatcaagcagacggaggccgggctcaccaggacgtccttggagcccccg 488
Query: 2133 agcggcgacgcgggctcgatacgctggcgggaggccaggctcggcagcagcaagcagctg 2192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 agcggcgacgcgggctcgatacgctggcgggaggccaggctcggcagcagcaagcagctg 548
Query: 2193 gtgacgtcacacatcgcagcaatgaacgcagcgacagcacaggtcgtcaccctcaccgcc 2252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtgacgtcacacatcgcagcaatgaacgcagcgacagcacaggtcgtcaccctcaccgcc 608
Query: 2253 gggccggcggaggaggtggaccacacggcggtcggcgccgccatcaccaccatcaccacc 2312
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 609 gggccggcggaggaagtggaccacacggcggtaggcgccgccatcaccaccatcaccacc 668
Query: 2313 aacctgcccgagatgacgaagggagtccagatgatcgctgccctcatggaggacgagcac 2372
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 669 aacctgcccgagatgacgaagggagtccagatgatcgctgccctcattgaggacgagcac 728
Query: 2373 tccggggacaacctcctggacgccaccaggaagctctgcaccgctttttccgacctgct 2431
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 729 tccggggacaacctcctggacgccaccaggaagctctgcaccgctttctccgacctgct 787
>BF01035X1G04
Length = 754
Score = 476 bits (240), Expect = e-133
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1540 tgctccgcctggacgagaagaccaaggagatcctgcagacctggccgctcaccaccgtca 1599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tgctccgcctggacgagaagaccaaggagatcctgcagacctggccgctcaccaccgtca 71
Query: 1600 ggaggtggtgcgccagtcccaacaccttcacgctggacttcggagactacagcgaccagt 1659
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 72 ggaggtggtgcgccagtcccaacaccttcacgctagacttcggagactacagcgaccagt 131
Query: 1660 actactcggtgcagacgacggaggccgaacagatcctgcaggtgatcgcgggctacatcg 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 actactcggtgcagacgacggaggccgaacagatcctgcaggtgatcgcgggctacatcg 191
Query: 1720 acatcatcgtgaggaggaggcgggccagggaccatctcggcctggagggagacgagggat 1779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 acatcatcgtgaggaggaggcgggccagggaccatctcggcctggagggagacgagggat 251
Query: 1780 ccgc 1783
||||
Sbjct: 252 ccgc 255
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 350,528
Number of extensions: 6891
Number of successful extensions: 6891
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6887
Number of HSP's successfully gapped: 3
Length of query: 3917
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3899
Effective length of database: 8,109,745
Effective search space: 31619895755
Effective search space used: 31619895755
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)