BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01498 (UTR included)
(2992 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1994_C1 1441 0.0
>BF14_1994_C1
Length = 901
Score = 1441 bits (727), Expect = 0.0
Identities = 736/739 (99%)
Strand = Plus / Plus
Query: 1844 ggatattctagacagaatgacgagcactagaagattcccgtgggtttgggccagtttgtt 1903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ggatattctagacagaatgacgagcactagaagattcccgtgggtttgggccagtttgtt 222
Query: 1904 ggtgctgatcagtattggtgggctgattgcatacgatgtatccagggtcggaggagattt 1963
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 223 ggtgctgatcagtattggtgggctgattgcatatgatgtatccagggtcggaggagattt 282
Query: 1964 ccccaagagtgcgactggtaaactgatgaatgacttgggtattcttgaacaaagtcagag 2023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ccccaagagtgcgactggtaaactgatgaatgacttgggtattcttgaacaaagtcagag 342
Query: 2024 agcatggcaaaagggtctgtctgtgtcggcccggggttatctgtggatggaaagcaatgc 2083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 agcatggcaaaagggtctgtctgtgtcggcccggggttatctgtggatggaaagcaatgc 402
Query: 2084 accagtgtattatgcccaaaccgtggaagcctgcaagccatatgcgcagctctccaaaga 2143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 accagtgtattatgcccaaaccgtggaagcctgcaagccatatgcgcagctctccaaaga 462
Query: 2144 tgcagtcaccattgccgttaagaagcttggaatcctatatgtcaatatgaaggaatacgt 2203
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tgcagtcaccattgccgtcaagaagcttggaatcctatatgtcaatatgaaggaatacgt 522
Query: 2204 tgttgacaagacacctatagttgtggcaactatagaacagtatgcacccggcgttgttga 2263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgttgacaagacacctatagttgtggcaactatagaacagtatgcacccggcgttgttga 582
Query: 2264 gactgttcaaagttacgctgtcaatggtttcgccgctgttaagaaatattcaaatgacta 2323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gactgttcaaagttacgctgtcaatggtttcgccgctgttaagaaatattcaaatgacta 642
Query: 2324 ctatcaaatgacagttgattatttatcgactaaggtctttgtaggtgattgggctccgga 2383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ctatcaaatgacagttgattatttatcgactaaggtctttgtaggtgattgggctccgga 702
Query: 2384 gatccttcacaacaagactcagttggccttaaacgctacaaagctgcacatgtgtacata 2443
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 703 gatccttcacaacaagactcagttggccttaaacgctacaaagctgcacatgtgcacata 762
Query: 2444 tttccactggttcagagagcaggtgaatgtgtactccaagataccgtgaagtttgtagtt 2503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tttccactggttcagagagcaggtgaatgtgtactccaagataccgtgaagtttgtagtt 822
Query: 2504 gtagatggccagtgaaagacactgaaacaatttcttttcgatatattatttaatttatat 2563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 gtagatggccagtgaaagacactgaaacaatttcttttcgatatattatttaatttatat 882
Query: 2564 ttacacgaccgatctttac 2582
|||||||||||||||||||
Sbjct: 883 ttacacgaccgatctttac 901
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 403,804
Number of extensions: 9235
Number of successful extensions: 9235
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9235
Number of HSP's successfully gapped: 1
Length of query: 2992
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2974
Effective length of database: 8,109,745
Effective search space: 24118381630
Effective search space used: 24118381630
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)