BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01514 (UTR included)
(1462 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C2 76 2e-13
BF01021B2B03 70 1e-11
BF01012A1B09 70 1e-11
BF01034A1E06 68 4e-11
BF01011A1H06 68 4e-11
BF14_729_C3 68 4e-11
>BF14_729_C2
Length = 1289
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/61 (91%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 1365 aaactacatactcccgatgcttcggttacttttcagcaacc--gctcacgggcagacgag 1422
||||||||||||||||| | ||||||||||||||||||||| | |||||||||||||||
Sbjct: 588 aaactacatactcccgacgtttcggttacttttcagcaaccgtgatcacgggcagacgag 529
Query: 1423 a 1423
|
Sbjct: 528 a 528
>BF01021B2B03
Length = 246
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1310 aatataaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 1344
|||||||||||||||||||||||||||||||||||
Sbjct: 207 aatataaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 241
>BF01012A1B09
Length = 841
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/58 (91%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 1345 gcggattttattattttaagaaactacatactcccgatgcttcggttacttttcagca 1402
||||||||||||||||||| ||||||||| |||||| | ||||||||||||||||||
Sbjct: 771 gcggattttattattttaa--aactacataatcccgacgtttcggttacttttcagca 826
>BF01034A1E06
Length = 446
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1311 atataaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 1344
||||||||||||||||||||||||||||||||||
Sbjct: 406 atataaaaaaaaaaaaaaaaaaaaaaaaaaaaaa 439
>BF01011A1H06
Length = 739
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/61 (90%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 1367 actacatactcccgatgcttcggttacttttcagcaacc--gctcacgggcagacgagat 1424
||||||||||||||| | |||||||||||||||| |||| | |||||||||||||||||
Sbjct: 518 actacatactcccgacgtttcggttacttttcagtaaccgtgatcacgggcagacgagat 459
Query: 1425 g 1425
|
Sbjct: 458 g 458
>BF14_729_C3
Length = 2041
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/80 (87%), Gaps = 4/80 (5%)
Strand = Plus / Minus
Query: 1345 gcggattttattattttaagaaactacatactcccgatgcttcggttacttttcagcaac 1404
|||||||||||||||| || ||||||||| |||||| | |||||||||||| |||||||
Sbjct: 1666 gcggattttattatttaaa--aactacataatcccgacgtttcggttactttgcagcaac 1609
Query: 1405 c--gctcacgggcagacgag 1422
| | |||||||||||||||
Sbjct: 1608 cgtgatcacgggcagacgag 1589
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 518,292
Number of extensions: 90513
Number of successful extensions: 90513
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 90454
Number of HSP's successfully gapped: 6
Length of query: 1462
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1445
Effective length of database: 8,119,229
Effective search space: 11732285905
Effective search space used: 11732285905
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)