BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01536 (UTR included)
(2402 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023A2A12 167 1e-40
BF01056B1D02 113 1e-24
BF01010B2F09 94 1e-18
BF01062A1A05 92 5e-18
BF01037B1H08 86 3e-16
BF01040A1G09 84 1e-15
BF01031B1E12 84 1e-15
BF01052B1H02 74 1e-12
>BF01023A2A12
Length = 723
Score = 167 bits (84), Expect = 1e-40
Identities = 123/136 (90%)
Strand = Plus / Plus
Query: 1 ttataatttcaaattataaatttgaaatcgccaatccgccttgagcgagtgtgatgatta 60
||||||||||||||||||| ||||||||| |||||| |||||||||||| ||| ||||||
Sbjct: 214 ttataatttcaaattataagtttgaaatcaccaatcagccttgagcgagcgtggtgatta 273
Query: 61 atgctctaaccttctcctcgtgaaaagaggcctttgctcagcagtgggccccaataggat 120
||||||||||||||||| |||| |||||||||||||||||||||| || || ||||| |
Sbjct: 274 atgctctaaccttctccatgtgataagaggcctttgctcagcagtgagctccgataggct 333
Query: 121 gatgatgttgatgata 136
||||||| ||||||||
Sbjct: 334 gatgatgatgatgata 349
>BF01056B1D02
Length = 778
Score = 113 bits (57), Expect = 1e-24
Identities = 116/135 (85%), Gaps = 3/135 (2%)
Strand = Plus / Plus
Query: 1 ttataatttcaaattataaatttgaaatcgccaatccgccttgagcgagtgtgatgatta 60
||||||||||||||||||| ||||||||||||| ||| ||||||| || ||| || |||
Sbjct: 615 ttataatttcaaattataagattgaaatcgccaacccgtcttgagcaagcgtggtggtta 674
Query: 61 atgctctaaccttctcctcgtgaaaagaggcctttgctcagcagtgggccccaataggat 120
||||||||||||| | |||| ||||||||||||||||||||||||| || ||||| |
Sbjct: 675 atgctctaacctt---catgtgagaagaggcctttgctcagcagtgggctccgataggct 731
Query: 121 gatgatgttgatgat 135
|||||| |||||||
Sbjct: 732 gatgataatgatgat 746
>BF01010B2F09
Length = 764
Score = 93.7 bits (47), Expect = 1e-18
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 11 aaattataaatttgaaatcgccaatccgccttgagcgagtgtgatgattaatgctctaac 70
|||||||||| || |||||||||||||| |||||||||| ||| ||||||||||||||||
Sbjct: 380 aaattataaaattaaaatcgccaatccgtcttgagcgagcgtggtgattaatgctctaac 321
Query: 71 cttctcc 77
|||||||
Sbjct: 320 cttctcc 314
>BF01062A1A05
Length = 777
Score = 91.7 bits (46), Expect = 5e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 40 cttgagcgagtgtgatgattaatgctctaaccttctcctcgtgaaaagaggcctttgctc 99
||||||| || ||| |||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 514 cttgagcaagcgtggtgattaatgctctaaccttctccttgtgagaagaggcctttgctt 573
Query: 100 agcagtgggc 109
||||||||||
Sbjct: 574 agcagtgggc 583
>BF01037B1H08
Length = 758
Score = 85.7 bits (43), Expect = 3e-16
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 22 ttgaaatcgccaatccgccttgagcgagtgtgatgattaatgctctaaccttctcctcgt 81
|||||||||||| ||| ||||||| || ||| || |||||||||||||||||| | ||
Sbjct: 239 ttgaaatcgccaccccgtcttgagcaagcgtggtgcttaatgctctaaccttctacatgt 298
Query: 82 gaaaagaggcctttgctcagcagtgggccccaataggatgatg 124
|| |||||||||||||||||| |||||| || ||||| |||||
Sbjct: 299 gagaagaggcctttgctcagctgtgggctccgataggctgatg 341
>BF01040A1G09
Length = 753
Score = 83.8 bits (42), Expect = 1e-15
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 5 aatttcaaattataaatttgaaatcgccaatccgccttgagcgagtgtgatgattaatgc 64
||||||||||||||| |||||||||||||| || ||||||| || ||| |||||||||
Sbjct: 10 aatttcaaattataagtttgaaatcgccaacccatcttgagcaagcgtggcgattaatgc 69
Query: 65 tctaaccttctcctcgtgaaaagaggcctttgctcagcagtgggccccaataggatgatg 124
| |||||||||| | || ||||||| | ||||||||||||| || ||||| |||||
Sbjct: 70 ttaaaccttctccatgcgagaagaggcttatgctcagcagtggcttccgataggctgatg 129
Query: 125 atgttgatga 134
||| ||||||
Sbjct: 130 atgatgatga 139
>BF01031B1E12
Length = 730
Score = 83.8 bits (42), Expect = 1e-15
Identities = 91/106 (85%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 22 ttgaaatcgccaatccgccttgagcgagtgtgatgattaatgctctaaccttctcctcgt 81
||||||||||||| ||| ||||||| || ||| ||||||||||||||||||||||| ||
Sbjct: 109 ttgaaatcgccaacccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtgt 168
Query: 82 gaaaagaggcctttgctcagcagtgggccccaataggatgatgatg 127
|| ||| || ||||||||||||||||| || ||||| | ||||||
Sbjct: 169 gagaag-gggatttgctcagcagtgggctccgataggcttatgatg 213
>BF01052B1H02
Length = 790
Score = 73.8 bits (37), Expect = 1e-12
Identities = 91/109 (83%)
Strand = Plus / Minus
Query: 1 ttataatttcaaattataaatttgaaatcgccaatccgccttgagcgagtgtgatgatta 60
||||||||| |||| || | |||||||||||||| ||| ||||||| || ||| || |||
Sbjct: 397 ttataatttgaaataattagtttgaaatcgccaacccgtcttgagcaagcgtggtgctta 338
Query: 61 atgctctaaccttctcctcgtgaaaagaggcctttgctcagcagtgggc 109
|||||||||| |||||| | || || |||| |||||||| ||||||||
Sbjct: 337 atgctctaactttctccatgggagaaaaggcgtttgctcaacagtgggc 289
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 260,264
Number of extensions: 12107
Number of successful extensions: 12107
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 12106
Number of HSP's successfully gapped: 8
Length of query: 2402
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2385
Effective length of database: 8,119,229
Effective search space: 19364361165
Effective search space used: 19364361165
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)