BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01576 (UTR included)
(2095 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A1F06 650 0.0
>BF01030A1F06
Length = 807
Score = 650 bits (328), Expect = 0.0
Identities = 331/332 (99%)
Strand = Plus / Plus
Query: 469 agtcgtcaatgagaagtggagcgttagttgcaatggaggcggagccggacctcagtactt 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 agtcgtcaatgagaagtggagcgttagttgcaatggaggcggagccggacctcagtactt 305
Query: 529 ttgaaaacaaatccggactagctgaagatatgaagtttcttgcctctatgcctgagctct 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ttgaaaacaaatccggactagctgaagatatgaagtttcttgcctctatgcctgagctct 365
Query: 589 gtgacgtcacatttcttgttggagatactcgagaaccagtatgtgcagtcaaagcagtat 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gtgacgtcacatttcttgttggagatactcgagaaccagtatgtgcagtcaaagcagtat 425
Query: 649 tggcagctcgtagcagagttttccaaaaaatgctttatcaagctccgagtccacaaagaa 708
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tggcagctcgcagcagagttttccaaaaaatgctttatcaagctccgagtccacaaagaa 485
Query: 709 aaaaagaaccagctcctcgggaaaataaattgagattatttttaaagagatcatctgaac 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aaaaagaaccagctcctcgggaaaataaattgagattatttttaaagagatcatctgaac 545
Query: 769 ctcttcttaatcttcagaatgcagctcaacag 800
||||||||||||||||||||||||||||||||
Sbjct: 546 ctcttcttaatcttcagaatgcagctcaacag 577
Score = 462 bits (233), Expect = e-129
Identities = 236/237 (99%)
Strand = Plus / Plus
Query: 833 tcaagagccttcttcacaacagcatcagactctaatcatagaagaatttgagcctgatgt 892
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tcaacagccttcttcacaacagcatcagactctaatcatagaagaatttgagcctgatgt 630
Query: 893 ttttcgtcagcttatcgaatacattcatactggctgcgtcacactacagcccagaacatt 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttttcgtcagcttatcgaatacattcatactggctgcgtcacactacagcccagaacatt 690
Query: 953 gttaggagtaatgaacgcagccgattattatggtttggatgaactacgccgcgcctgcgc 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gttaggagtaatgaacgcagccgattattatggtttggatgaactacgccgcgcctgcgc 750
Query: 1013 tggttttgtccaatgctgtatcactgttgatacggtgtgcgctcttctagcatctgc 1069
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tggttttgtccaatgctgtatcactgttgatacggtgtgcgctcttctagcatctgc 807
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 259,777
Number of extensions: 5660
Number of successful extensions: 5660
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5660
Number of HSP's successfully gapped: 2
Length of query: 2095
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2078
Effective length of database: 8,119,229
Effective search space: 16871757862
Effective search space used: 16871757862
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)