BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01598 (UTR included)
(4411 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A2F03 1273 0.0
>BF01030A2F03
Length = 668
Score = 1273 bits (642), Expect = 0.0
Identities = 654/658 (99%)
Strand = Plus / Plus
Query: 3047 cgccacactcgccgctctattaagtttcacgtggaccgtggtgctgcctgtgttgctctg 3106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 cgccacactcgccgctctattaagtttcacgtggaccgtggtgctgcctgtgttgctctg 70
Query: 3107 tgcaatatgcataatggattttcggactggacagcaacgacaattgtacagttggcggaa 3166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgcaatatgcataatggattttcggactggacagcaacgacaattgtacagttggcggaa 130
Query: 3167 acctatcagttactggccaatatggacacgccaagtggcagttttcttacagctgaccgc 3226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 acctatcagttactggccaatatggacacgccaagtggcagttttcttacagctgaccgc 190
Query: 3227 acttctgattgtacctgtaacagctttcgtacaaacttggatatacatatataaaggacc 3286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 acttctgattgtacctgtaacagctttcgtacaaacttggatatacatatataaaggacc 250
Query: 3287 taccgatatattagaggatgacgagtccatcatttgcgccgatgacccgagaattcagaa 3346
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tacagatatattagaggatgacgagtccatcatttgcgccgatgacccgagaattcagaa 310
Query: 3347 tctgtatcgtcctcgtattggttcgtcgggctccacgccgattgttatcggtgcggttga 3406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tctgtatcgtcctcgtattggttcgtcgggctccacgccgattgttatcggtgcggttga 370
Query: 3407 agataggccttcgccccccgaccctcccccgaaatatacgccgccgccatcatactcgac 3466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agataggccttcgccccccgaccctcccccgaaatatacgccgccgccatcatactcgac 430
Query: 3467 cgccacaggagcccgacttatgcataccttgaggcggagctttagaacactaaggagaat 3526
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cgccacgggagcccgacttatgcataccttgaggcggagctttagaacactaaggagaat 490
Query: 3527 aacatcaacacgcgaggagacggtcgacgagacatcactacccatcacactgagcgagag 3586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aacatcaacacgcgaggagacggtcgacgagacatcactacccatcacactgagcgagag 550
Query: 3587 tgtcgacagacagccgcagactagcgaccagcggaccttcacaccggtgacactcaccga 3646
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tgtcgacagacagccgcagactagcgaccagcggaccttcacaccggtgacactcaccgt 610
Query: 3647 cgagccggacacgacacgacaaatccgtccgacgtcctcacgacaatcgctcacactc 3704
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cgagccggatacgacacgacaaatccgtccgacgtcctcacgacaatcgctcacactc 668
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 488,637
Number of extensions: 9710
Number of successful extensions: 9710
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9710
Number of HSP's successfully gapped: 1
Length of query: 4411
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4393
Effective length of database: 8,109,745
Effective search space: 35626109785
Effective search space used: 35626109785
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)