BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01608 (UTR included)
(1969 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B1C01 543 e-154
>BF01034B1C01
Length = 750
Score = 543 bits (274), Expect = e-154
Identities = 298/305 (97%), Gaps = 2/305 (0%)
Strand = Plus / Plus
Query: 1556 gtgtgtggaggacagaggctttaaaattattatatatatatacacatacatgtaatatta 1615
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13 gtgtgtggaggacagaggctttaaaattattata--tatatacacatacatgtaatatta 70
Query: 1616 acattgatataagtcaatgagcatataattgtaaaactgagaatattgttcacttgtccc 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 acattgatataagtcaatgagcatataattgtaaaactgagaatattgttcacttgtccc 130
Query: 1676 ctacatgactctgtatataacaatatatcacaccatcccacaaccgggatgattaaattt 1735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ctacatgactctgtatataacaatatatcacaccatcccacaaccgggatgattaaattt 190
Query: 1736 taatgtttcctacagtctgttcttagacactacggggtgaatgtgatacatgtggctggt 1795
||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 191 taaagtgtcctacagtctgttctaagacactacggggtgaatgtgatacatgtggctggt 250
Query: 1796 tatactcataggaacttaatacatttggttttaacaatgaattattgcaatatttataca 1855
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 251 tatacccataggaacttaatacatttggtttgaacaatgaattattgcaatatttataca 310
Query: 1856 ataac 1860
|||||
Sbjct: 311 ataac 315
Score = 182 bits (92), Expect = 1e-45
Identities = 101/104 (97%)
Strand = Plus / Plus
Query: 1866 aattattgctgattttgtaaacagacctctaaatttttttttatttcaaattaccaaact 1925
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 565 aattattgctgattttgtaaacagagctctaaatttttttttatttcaaattaccaaact 624
Query: 1926 aactacttcatatgttgccatattaaaaaatccaactgtcaatc 1969
|||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 625 aactacttcatatgttgccatagtaaaaaattcaactgtcaatc 668
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 260,324
Number of extensions: 10029
Number of successful extensions: 10029
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10028
Number of HSP's successfully gapped: 2
Length of query: 1969
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1952
Effective length of database: 8,119,229
Effective search space: 15848735008
Effective search space used: 15848735008
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)