BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01612 (UTR included)
(3346 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045B1D11 977 0.0
>BF01045B1D11
Length = 779
Score = 977 bits (493), Expect = 0.0
Identities = 563/585 (96%), Gaps = 1/585 (0%)
Strand = Plus / Plus
Query: 2763 gaaatggggaccatacatgaaggtagggagcagacatacatacgctcgcccgcggatata 2822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaatggggaccatacatgaaggtagggagcagacatacatacgctcgcccgcggatata 60
Query: 2823 ttcacagttacaactaggagttaatatgtatagggaattaggataagtc-tatatacttt 2881
|||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||
Sbjct: 61 ttcacagttacaactaggagttaatatgtatagggaattaggataatttatgtatacttt 120
Query: 2882 cctggtaataaatcactttctataataaatatttgaatgtaagtaattcgtgaagatttt 2941
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctggtaataaatcactttttataataaatatttgaatgtaagtaattcgtgaagatttt 180
Query: 2942 cttgtaaatatcatgtgctggcaaatatttttatatccttcgaaacaagaaggttctcat 3001
||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 181 cttgtaaatattatgtgctggcaaatttttttatttccttcgaaacaagaaggttctcat 240
Query: 3002 ttagatagtatttttattttcatatatattattttaatttttaaaatatttttgacatgg 3061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttagatagtatttttattttcatatatattattttaatttttaaaatatttttgacatgg 300
Query: 3062 acaagctgaaaggatctcttttaaatatttttatataaataattttattcatcattacaa 3121
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acacgctgaaaggatctcttttaaatatttttatataaataattttattcatcattacaa 360
Query: 3122 aaaaaaaatattttttttttgaaaacgctcatattatgtaatcctgcttgcacttaactc 3181
|||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 aaaaaatatatcttttttttgaaaacgcttatattatgtaatcctgcttgcacttaactc 420
Query: 3182 tcagtatgacagatttcagtttagtcaaataaatcaatataatgtccttagcattagtat 3241
||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 421 tcagtgtgacagatttcagtttagtcaaataaatcaatataaagtccttaccattagtat 480
Query: 3242 tggcaactacatactgtcagtatcaacgttttaactcgtatatacgaaattttttttaat 3301
||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||
Sbjct: 481 tggcaactacatactgtcagtttcaacgttttaactcgtatatacgaacattttttttat 540
Query: 3302 atcatgtaagagggaaaagacgttgcatgtaaattttttatattt 3346
| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 541 aacatgtattagggaaaagacgttgcatgtaaattttttatattt 585
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 459,873
Number of extensions: 11149
Number of successful extensions: 11149
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11146
Number of HSP's successfully gapped: 1
Length of query: 3346
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3328
Effective length of database: 8,109,745
Effective search space: 26989231360
Effective search space used: 26989231360
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)