BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01614 (UTR included)
(6100 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B2F11 287 1e-76
>BF01041B2F11
Length = 772
Score = 287 bits (145), Expect = 1e-76
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 5956 tagtccgtatttttatgacagataataaatattagtgttttaagtataaatgaggaattg 6015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tagtccgtatttttatgacagataataaatattagtgttttaagtataaatgaggaattg 71
Query: 6016 atggcttgatcgcgcggcgtgctgtattcagacgctggctgactgcttgtttgtagctaa 6075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atggcttgatcgcgcggcgtgctgtattcagacgctggctgactgcttgtttgtagctaa 131
Query: 6076 caccactcgggtgctaatattttgc 6100
|||||||||||||||||||||||||
Sbjct: 132 caccactcgggtgctaatattttgc 156
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 111,051
Number of extensions: 15940
Number of successful extensions: 15940
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15940
Number of HSP's successfully gapped: 1
Length of query: 6100
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6082
Effective length of database: 8,109,745
Effective search space: 49323469090
Effective search space used: 49323469090
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)