BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01626 (UTR included)
(4216 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052A2A02 1572 0.0
>BF01052A2A02
Length = 857
Score = 1572 bits (793), Expect = 0.0
Identities = 832/845 (98%)
Strand = Plus / Plus
Query: 2970 aatactccaacaacaagaactacagcgagctgccctcaaactcctgacgagcaagcagag 3029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aatactccaacaacaagaactacagcgagctgccctcaaactcctgacgagcaagcagag 72
Query: 3030 ctggatttcgacggagatacgggcgagatatttgaagaacattccggaaaaaaatcaatt 3089
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 73 ctggatttcgacggagatacgggcgagatttttgaagaacattccggaaaaaaatcaatt 132
Query: 3090 acaccaataaggctattgagaaaaaatcactccctagaaccacaggagccatcgaggaac 3149
|||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 133 acaccaattaggctattgagaaaaaatcactctttagaaccacaagagccatcgaggaac 192
Query: 3150 aggagacattccatgacacattccagtgaatcggattattcagaaaaagatccagtggac 3209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aggagacattccatgacacattccagtgaatcggattattcagaaaaagatccagtggac 252
Query: 3210 tctacggaaaccgttacagccaagaacattaatcaagagcctctccacttgaagtcgcac 3269
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 253 tctacggaaaccgttacagccaagaacattaatcaagagcctctccacttgaagtcacac 312
Query: 3270 aagtttttctctaacatgtcgcacgaattagaaaatgcaaagaaaaactgcgaaagccta 3329
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 313 aagtttttctctaacatgtcgcacgaattagaaaatgcaaagaaaaactgtgaaagcctg 372
Query: 3330 ttgagcgtgaaacagacaaacttacaaagcgttgcttcgacaataaataactttcagaag 3389
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 373 ttgagcgtgaaacagacaaacttacaaagcgttgcctcgacaataaataactttcagaag 432
Query: 3390 aaatgcgaggttttcaagccgccggtacagaagaacacgacagtgtccaccatcagcgac 3449
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaatgcgaggttttcaagccgccagtacagaagaacacgacagtgtccaccatcagcgac 492
Query: 3450 aattcggttaagaatagtattagtagcttgccgtcgccggcagtctttggtggtggcaat 3509
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 493 aattcggttaagaatagtattagtagcctgccgtcgccggcagtctttggtggtggcaat 552
Query: 3510 ccgttcttgatgtatttatgtctgacagtattactacagcacagagattacataatgaga 3569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ccgttcttgatgtatttatgtctgacagtattactacagcacagagattacataatgaga 612
Query: 3570 aaccggatggactacaacgaactagcgatgcatttcgacaagatggtgcgtaaacataac 3629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aaccggatggactacaacgaactagcgatgcatttcgacaagatggtgcgtaaacataac 672
Query: 3630 gtaaacagggtattgaatcaggcgcggcagatgtacgcgatgtatttgaaacagcaagcg 3689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gtaaacagggtattgaatcaggcgcggcagatgtacgcgatgtatttgaaacagcaagcg 732
Query: 3690 aacaagaccggtgacgtcaccacctgaaagcttcattcgtgaccaaaatatttccaataa 3749
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 733 aacaagaccggtgatgtcaccacctgaaaacttcattcgtgaccaaaatatttccaataa 792
Query: 3750 ttacgtttcattgctcacaatttatatttaatgagttaacgtgtaagttaaagtcaaacc 3809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ttacgtttcattgctcacaatttatatttaatgagttaacgtgtaagttaaagtcaaacc 852
Query: 3810 atagc 3814
|||||
Sbjct: 853 atagc 857
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 478,432
Number of extensions: 9364
Number of successful extensions: 9364
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9364
Number of HSP's successfully gapped: 1
Length of query: 4216
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4198
Effective length of database: 8,109,745
Effective search space: 34044709510
Effective search space used: 34044709510
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)