BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01630 (UTR included)
(1852 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B1F12 1473 0.0
>BF01051B1F12
Length = 810
Score = 1473 bits (743), Expect = 0.0
Identities = 788/803 (98%), Gaps = 10/803 (1%)
Strand = Plus / Plus
Query: 962 ctacaaggagcacggggccgagagccccaaggccccggcgccggcatcggattacgcggt 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ctacaaggagcacggggccgagagccccaaggccccggcgccggcatcggattacgcggt 72
Query: 1022 gcctttagtagtgaatggcaacgtcatgtgcgatatcgtggaagccgccttacagcagct 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gcctttagtagtgaatggcaacgtcatgtgcgatatcgtggaagccgccttacagcagct 132
Query: 1082 tcctcctacgccgcccagttcgccgccctccccgccgtgctcgctgccagtgccggggtc 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tcctcctacgccgcccagttcgccgccctccccgccgtgctcgctgccagtgccggggtc 192
Query: 1142 attgcaggccccgtgtataccctcacccgcctcgctcaccccctccccctcccccacgga 1201
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 193 attgcaggccccgtgtataccctcacccgcctcgctcaccccatccccctcccccacgga 252
Query: 1202 gagctcccccacgacggtcatgaccctagcgccgtcgtcactgccacccagaaaacgaaa 1261
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gagctcccccacgacagtcatgaccctagcgccgtcgtcactgccacccagaaaacgaaa 312
Query: 1262 gctcgtccctcacgtggagccggtgcacacggagccggcggtccgccacacgtccgtcat 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gctcgtccctcacgtggagccggtgcacacggagccggcggtccgccacacgtccgtcat 372
Query: 1322 acaattcgcgccggcctctagcgtttcatagtagcgtatgtttcacagtaattaatatta 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 acaattcgcgccggcctctagcgtttcatagtagcgtatgtttcacagtaattaatatta 432
Query: 1382 aattagtttcctaaggctatttttcttgaaggctgttagttgactccgcgccctgcggcc 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aattagtttcctaaggctatttttcttgaaggctgttagttgactccgcgccctgcggcc 492
Query: 1442 ggggctcggtggccggtggctcggtgcggtggctcggcgcggt-----ggctcggtggct 1496
||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 493 ggggctcggtggccggtggct-----cggtggctcggcgcggtggctcggctcggtggct 547
Query: 1497 cggtgcggtggctcggtagcgtggtagcgtggtagcgtggtagcgtacattctgtttaca 1556
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 548 cggcgcggtggctcggtagcgtggtagcgtggtagcgtggtagcgtacattctgtttata 607
Query: 1557 agtctacatgacctacatttgaattatgttgtatgccgcgatgacgtattgtttaatctt 1616
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 608 agtctacatgacctacatttgagttatgttgtatgccgcgatgacgtattgtttaatctt 667
Query: 1617 acaaaaagactaattagatgtgtaattgtatttgtcctatcattattagtagagtaagtt 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 acaaaaagactaattagatgtgtaattgtatttgtcctatcattattagtagagtaagtt 727
Query: 1677 ttgtatttatctactatgtgttagtacgttgaagtaaacattaagtaaataattaattgt 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ttgtatttatctactatgtgttagtacgttgaagtaaacattaagtaaataattaattgt 787
Query: 1737 tattttattaaaattaatttagt 1759
|||||||||||||||||||||||
Sbjct: 788 tattttattaaaattaatttagt 810
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 163,563
Number of extensions: 3086
Number of successful extensions: 3086
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3071
Number of HSP's successfully gapped: 1
Length of query: 1852
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1835
Effective length of database: 8,119,229
Effective search space: 14898785215
Effective search space used: 14898785215
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)