BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01636 (UTR included)
(3319 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045A2F08 1390 0.0
BF01018A1F03 428 e-119
>BF01045A2F08
Length = 760
Score = 1390 bits (701), Expect = 0.0
Identities = 722/729 (99%)
Strand = Plus / Plus
Query: 2153 ggtgtgcggcatgaccgtactgtgctatccgctgatcttcgaagtatccgagttttatct 2212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgtgcggcatgaccgtactgtgctatccgctgatcttcgaagtatccgagttttatct 60
Query: 2213 gtatagagacatggctcttcttatagacgatattaagacagaattgcagtttgtgggcaa 2272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtatagagacatggctcttcttatagacgatattaagacagaattgcagtttgtgggcaa 120
Query: 2273 atattggcgtctttccggtcgtccgacagtctgcctgttagtccgcgaggaacacatgcg 2332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atattggcgtctttccggtcgtccgacagtctgcctgttagtccgcgaggaacacatgcg 180
Query: 2333 ggatccgcacttcaaacagatgctggatctgttcgctatgctcaagaaaggacattgcga 2392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggatccgcacttcaaacagatgctggatctgttcgctatgctcaagaaaggacattgcga 240
Query: 2393 cggagttaaagtgagactcggaagactacagaatttgatctccagctcgtgtatagagca 2452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cggagttaaagtgagactcggaagactacagaatttgatctccagctcgtgtatagagca 300
Query: 2453 cttggatttcatgagccagggtgagtttccgtcggagatgttcacacaattcaagcagct 2512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttggatttcatgagccagggtgagtttccgtcggagatgttcacacaattcaagcagct 360
Query: 2513 ccagcatgattacatcggctaccagtcgctgacggatgtaccgaggacgatgacctacca 2572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccagcatgattacatcggctaccagtcgctgacggatgtaccgaggacgatgacctacca 420
Query: 2573 cgagagagacatggacgtcaacagctacaggaacaggtccaccggagacgtcgtggaagc 2632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgagagagacatggacgtcaacagctacaggaacaggtccaccggagacgtcgtggaagc 480
Query: 2633 cttgaggaccaccgacagtatatacgctcaagcccaactgtggggcatattaatagagag 2692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttgaggaccaccgacagtatatacgctcaagcccaactgtggggcatattaatagagag 540
Query: 2693 agagggaccgatgtatgaggtgaacggcactcgtgcgcttgaagcgctgaagtctctgta 2752
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 541 agagggaccgatgtatgaggtgaacggcactcgtgcacttgaagcgctaaagtctctgta 600
Query: 2753 cggcagcgctggtattctccgtcactggcgtgctgtaagatactgctcgtcgttgctgaa 2812
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 601 cggcagcgctggtattctccgtcactggcgcgccgtaagatactgctcgtcgttgctgaa 660
Query: 2813 tcacaccgtggactccatcagccccttcatcaccacggttctggtcagcgggaaacaggt 2872
||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 661 tcacaccgtggactcaatcagccccttcatcaccacagtgctggtcagcgggaaacaggt 720
Query: 2873 atttgataa 2881
|||||||||
Sbjct: 721 atttgataa 729
>BF01018A1F03
Length = 790
Score = 428 bits (216), Expect = e-119
Identities = 219/220 (99%)
Strand = Plus / Plus
Query: 2651 tatatacgctcaagcccaactgtggggcatattaatagagagagagggaccgatgtatga 2710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tatatacgctcaagcccaactgtggggcatattaatagagagagagggaccgatgtatga 70
Query: 2711 ggtgaacggcactcgtgcgcttgaagcgctgaagtctctgtacggcagcgctggtattct 2770
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 71 ggtgaacggcactcgtgcgcttgaagcgctaaagtctctgtacggcagcgctggtattct 130
Query: 2771 ccgtcactggcgtgctgtaagatactgctcgtcgttgctgaatcacaccgtggactccat 2830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccgtcactggcgtgctgtaagatactgctcgtcgttgctgaatcacaccgtggactccat 190
Query: 2831 cagccccttcatcaccacggttctggtcagcgggaaacag 2870
||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cagccccttcatcaccacggttctggtcagcgggaaacag 230
Score = 242 bits (122), Expect = 3e-63
Identities = 128/130 (98%)
Strand = Plus / Plus
Query: 3184 cagttgactgtaggtgtgatcgggcggaaggagacggtgtttgacaagccaatgaccccc 3243
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 228 cagttgactgtaggcgtgatcggacggaaggagacggtgtttgacaagccaatgaccccc 287
Query: 3244 ggtgagatacagtctgtcatgtactccaccatacagccctatgacatcataggtgctgta 3303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ggtgagatacagtctgtcatgtactccaccatacagccctatgacatcataggtgctgta 347
Query: 3304 ctacaacagg 3313
||||||||||
Sbjct: 348 ctacaacagg 357
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 352,718
Number of extensions: 6670
Number of successful extensions: 6670
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6670
Number of HSP's successfully gapped: 3
Length of query: 3319
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3301
Effective length of database: 8,109,745
Effective search space: 26770268245
Effective search space used: 26770268245
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)