BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01637 (UTR included)
(2707 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A1H08 1316 0.0
BF01027B2G02 922 0.0
>BF01017A1H08
Length = 728
Score = 1316 bits (664), Expect = 0.0
Identities = 710/724 (98%), Gaps = 1/724 (0%)
Strand = Plus / Plus
Query: 1658 gccatctcccttgctggatgtcactgatctcatcgaaggattgcctcgccagtgcactgt 1717
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccatctcctttgctggatgtcactgatctcatcgaaggattgcctcgccagtgcactgt 60
Query: 1718 atgtggcggtcttgctcgctgggaatgttcttcgtgtgcagggggcgctctcgacgcggg 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtggcggtcttgctcgctgggaatgttcttcgtgtgcagggggcgctctcgacgcggg 120
Query: 1778 ggccttgtgcaactcctgcctgaggttggcacacgccacccgacccacacataaggccgt 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggccttgtgcaactcctgcctgaggttggcacacgccacccgacccacacataaggccgt 180
Query: 1838 tcctttaactatcagtgaagaatatgcgaatattctcgagtcgtgtccagtgccgagggt 1897
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcctttaactgtcagtgaagaatatgcgaatattctcgagtcgtgtccagtgccgagggt 240
Query: 1898 gtacatggagttgtttgctgtgctctgtatagagaccagtcactacgtagccttcgtcaa 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtacatggagttgtttgctgtgctctgtatagagaccagtcactacgtagccttcgtcaa 300
Query: 1958 gacaggagtcggccatgacgcgccctggtgtttcttcgactcaatggccgacaggaaggg 2017
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gactggagtcggccatgacgcgccctggtgtttcttcgactcaatggccgacaggaaggg 360
Query: 2018 ggagcgcaacggttacaacatcccagagatcgtgtgtgtgagtgagctggggtcgtggct 2077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggagcgcaacggttacaacatcccagagatcgtgtgtgtgagtgagctggggtcgtggct 420
Query: 2078 gagcgaggagggccgcgcgctcgctcgggctgcgcccctcgaccgccacctgcccgcgcc 2137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagcgaggagggccgcgcgctcgctcgggctgcgcccctcgaccgccacctgcccgcgcc 480
Query: 2138 ggcaaaacgactcctgtcagacgcatacatgtgcttctaccgcagccccgatgtcgctat 2197
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggcgaaacgactgctgtcagacgcatacatgtgcttctaccgcagccccgatgtcgctat 540
Query: 2198 gtacagataaaaaaaactcatcgtagtctatgcaaaattgtctatgagtgtattttattt 2257
|||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 541 gtacagat-aaaaaaactcatcgttgtctatggaaaattgtctatgagtgtattttattt 599
Query: 2258 atttattacatatctgtacgcgccccgtacaataaaagtagaattttaattattgtatta 2317
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 600 atttattacatatctgtacgggccccgtacaataaaaatagaattttaattattgtatta 659
Query: 2318 aatttttcgttgtactaaattgttataaagcagttattcctacaacttatgtaggaaaaa 2377
||||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||||
Sbjct: 660 aattttttgttgtactaaattgttatgaagcagttatacctgcaacttatgtaggaaaaa 719
Query: 2378 ctgt 2381
||||
Sbjct: 720 ctgt 723
>BF01027B2G02
Length = 613
Score = 922 bits (465), Expect = 0.0
Identities = 473/476 (99%)
Strand = Plus / Plus
Query: 400 agcttgaattattcaacctcattggagggagttggccaccagctccaagggaacctgagc 459
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 138 agcttgaattattcaacctcattggagggagttggccaccggctccaagggaacctgagc 197
Query: 460 gtttagagtatgggtcagtgccccgtggtgcgagacgaactatgcagcactcgggacaca 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gtttagagtatgggtcagtgccccgtggtgcgagacgaactatgcagcactcgggacaca 257
Query: 520 atgaaaggatcaagtctgtaaacctgattaatcacctggcaccggaaaagagaaaaataa 579
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 258 atgaaaggatcaagtctgtaaacctgattaatcacctggcactggaaaagagaaaaataa 317
Query: 580 gacaaaatacgtcaaacagatctgggatcagtgaggagtctgtacaaagtaacaaaatgg 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gacaaaatacgtcaaacagatctgggatcagtgaggagtctgtacaaagtaacaaaatgg 377
Query: 640 tgaacgaaactaaaaaggttgagactggagtcttaattgatgtctgcggtggcgatgtca 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgaacgaaactaaaaaggttgagactggagtcttaattgatgtctgcggtggcgatgtca 437
Query: 700 acgaagagttttatgactctccgtcgttgggatccccgcgtgctgttaatttggaggctt 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 acgaagagttttatgactctccgtcgttgggatccccgcgtgctgttaatttggaggctt 497
Query: 760 cgagtcagtccccgcctgttttagatgacatcggagtgggttctctggtcgaagtagcga 819
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 498 cgagtcagtccccgcctgttttagatgacatcggagtgggttctctggtcgangtagcga 557
Query: 820 ctgacgttgatcaaaactactacggagttgtgagatggatcggactcattgatgac 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctgacgttgatcaaaactactacggagttgtgagatggatcggactcattgatgac 613
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 331,564
Number of extensions: 7636
Number of successful extensions: 7636
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7635
Number of HSP's successfully gapped: 2
Length of query: 2707
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2690
Effective length of database: 8,119,229
Effective search space: 21840726010
Effective search space used: 21840726010
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)