BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01652 (UTR included)
(3898 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B2D09 1400 0.0
>BF01041B2D09
Length = 749
Score = 1400 bits (706), Expect = 0.0
Identities = 737/749 (98%)
Strand = Plus / Plus
Query: 2078 agaggtgatggacacctggaccacacagacgggatacccgatcctcaccgtcaccaggga 2137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaggtgatggacacctggaccacacagacgggatacccgatcctcaccgtcaccaggga 60
Query: 2138 ctactccgacaagtcgcttacaatctcacagaagcgttacctgtctctgggcgtcggtcg 2197
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctactccgacaagtcgctcaccatctcacagaagcgttacctgtctctgggcgtcggtcg 120
Query: 2198 gacctcccaagcgtggtgggtccctctaagcgttctctgtgagaaagacagaaaaagcga 2257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacctcccaagcgtggtgggtccctctaagcgttctctgtgagaaagacagaaaaagcga 180
Query: 2258 gagcgagagcgtccagtggttaggagatacggagggagtgacgaacgaacatagatacga 2317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagcgagagcgtccagtggttaggagatacggagggagtgacgaacgaacatagatacga 240
Query: 2318 acacggctctggagcgagcgagtgggttctgttcaactacaacatgatcgctccatacag 2377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acacggctctggagcgagcgagtgggttctgttcaactacaacatgatcgctccatacag 300
Query: 2378 agtcaactacgatcagagaaattggaagcttctcatacagactctgacgagtgaccagta 2437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtcaactacgatcagagaaattggaagcttctcatacagactctgacgagtgaccagta 360
Query: 2438 caccctcatcccggtcgaaggtcgagtgcagttgctgtccgacgcttttgagctggcgtg 2497
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 caccctcatcccggtcgaaggtcgagtgcagttgctatccgacgcttttgagctggcgtg 420
Query: 2498 gaacaatcagctcgactatggaatgactttacagttggcgagctacctgaagagggagac 2557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaacaatcagctcgactatggaatgactttacagttggcgagctacctgaagagggagac 480
Query: 2558 ggaatacttgcctctctacacggggctgtcggctttagctaagattgagaacgtactgaa 2617
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 481 ggaatacttgcctctctacacggggctgtcagctttagctaagattgagaacgtactgaa 540
Query: 2618 acgaagttccgagtacggagccttccagaagtttatcagaagactcctcaacaacgtcta 2677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acgaagttccgagtacggagccttccagaagtttatcagaagactcctcaacaacgtcta 600
Query: 2678 ccagaaaggaggtttggctctgaagaggatcgtcgacggcgacgacttgaacagcgtcaa 2737
|||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 601 ccagaagggaggtttggctctcaagaggatcgtcgacggcgacaacttgaacagcgtcaa 660
Query: 2738 gcttcagacgactgtgagctcttgggcctgcagcgtgaagatccccggctgtgaggagaa 2797
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 661 gcttcagacgactgtgagctctnnnnnctgcagcgtgaagatccccggctgtgaggagaa 720
Query: 2798 cgctatagacatgttcaacgactggatga 2826
|||||||||||||||||||||||||||||
Sbjct: 721 cgctatagacatgttcaacgactggatga 749
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 315,525
Number of extensions: 5219
Number of successful extensions: 5219
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5218
Number of HSP's successfully gapped: 1
Length of query: 3898
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3880
Effective length of database: 8,109,745
Effective search space: 31465810600
Effective search space used: 31465810600
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)