BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01672 (UTR included)
(740 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A1H09 1033 0.0
>BF01062A1H09
Length = 824
Score = 1033 bits (521), Expect = 0.0
Identities = 597/620 (96%), Gaps = 3/620 (0%)
Strand = Plus / Plus
Query: 66 cagattgcgaaggacgcagtcccgtgaaggcgccaacctcgaatatctgaagaacgtggt 125
||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 206 cagattgcgaaggactcagtcttgtgaaggcgccaacctcgaatatctgaagaacgtggt 265
Query: 126 gatatcgtatctgatgtctagtgactacgtcggccgcagacacatgctgaacgccatagc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gatatcgtatctgatgtctagtgactacgtcggccgcagacacatgctgaacgccatagc 325
Query: 186 cgctgtgctccacttcacagacaatgaaaggaaggccgtgctcagcacgctgtaaccaat 245
||||||||||||||||||||||| ||||||||||||||||||||| || ||||||| |||
Sbjct: 326 cgctgtgctccacttcacagacagtgaaaggaaggccgtgctcagtacactgtaacgaat 385
Query: 246 aaactaaaaatatcttcactgtacacgtg--gttttttattaagtgtagatcaatcaatg 303
||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| |||
Sbjct: 386 aaactaaaaatatgttcactgtacacgtgcggttttttattgagtgtagatcaatcgatg 445
Query: 304 ttaatgatttcgttttttaatttatttcatacgtttatagatggcgctatcttgtatgtg 363
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttaatgatttc-ttttttaatttatttcatacgtttatagatggcgctatcttgtatgtg 504
Query: 364 gataatgtcccacacatttatttacattaatataaactgtgccctcacttggacacaatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gataatgtcccacacatttatttacattaatataaactgtgccctcacttggacacaatg 564
Query: 424 ttcctatttaatgtactagaaaatatagaaaggaatattcatggacacgaccaggagtcg 483
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 565 ttcctatttaatgtactagaaaatatagaacggaatattcatggacacgaccaggagtcg 624
Query: 484 actctgcgacctccgaccggccgaaacagctgtagcgaggcgcttgaactaatataacat 543
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 625 actctgcgacctccgaccggccgaaacagctgtagcaaggcgcttgaactaatataacat 684
Query: 544 tttatttattaataattgtattattttttatattaattaaatagtaatagtgattgttct 603
||||| |||||||||| | |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 685 tttatatattaataatggcattattttttatattaatgaaatagtaatagtgattgttct 744
Query: 604 tgttgttacatgattaatcattgtctgtgcttgaatctatttttactttttaaattaagt 663
||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 745 tgttgttccatgattaaccattgtctgtgcttgaatctattttaactttttaaattaagt 804
Query: 664 gactagtagatcaatgtata 683
||||| ||||||||||||||
Sbjct: 805 gactattagatcaatgtata 824
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 113,529
Number of extensions: 3007
Number of successful extensions: 3007
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3005
Number of HSP's successfully gapped: 1
Length of query: 740
Length of database: 8,280,457
Length adjustment: 16
Effective length of query: 724
Effective length of database: 8,128,713
Effective search space: 5885188212
Effective search space used: 5885188212
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)