BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01719 (UTR included)
(2623 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013B2F09 918 0.0
>BF01013B2F09
Length = 546
Score = 918 bits (463), Expect = 0.0
Identities = 523/546 (95%), Gaps = 1/546 (0%)
Strand = Plus / Plus
Query: 897 gaaatgggtgctccgttcattgaaatggtcggctttgagaagatacatcagaaacagaaa 956
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gaaatgggtgctccgttcattgaaatgggcggctttgagaagatacatcagaaacagaaa 60
Query: 957 tttgatcgtctccaagaggtttgtgtccacgaccagaacatatccagggctggtgatgta 1016
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgatcgcctccaagaggtttgcgtccacgaccagaacatatccagggctggtgatgta 120
Query: 1017 gcagctctgtgccctaacgttcgaagcttggatgtctcccagaacttgttttcaaactgg 1076
||||||||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 121 gcagctctgtgtcctaacgttcgaagcctggatgtctcccaaaacctgttttcaaactgg 180
Query: 1077 cgggagatcattgaattatcagcacaactgccattgaaagaaattgatgtgagtaagaat 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgggagatcattgaattatcagcacaactgccattgaaagaaattgatgtgagtaagaat 240
Query: 1137 cgcatggcaatcgatatacctgaagaaacactggaacagctctcaatacactttgctagc 1196
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 cgcatggcaatcgatatacctgaagaaacactggaacagctctnnntacactttgctagc 300
Query: 1197 ctggagaagataaacatctcggtctgtgattatgaatggtcggatgtactcgcactctcc 1256
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 301 ctggagaagataaacatctcggtctgtgattatgaatgggnggatgtactcgcactctcc 360
Query: 1257 catctctggcctaaaatcaatgagatcatagcagcctacaacagaatcaccatcattaac 1316
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 361 catctctggcctaaaatcaatgagatcatagcagcctacaacagaatcnnnnncattaac 420
Query: 1317 ccaccggcagtgaccctacggacattaacaatcctcaggctggacggcaaccccatag-a 1375
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |
Sbjct: 421 ccaccggcagtgaccctacggacattaacaatcctcaggctggatggcaaccccatngna 480
Query: 1376 atcatggtgtgaggtcattaacctgggcctcaaaaacctcaaagtgttaagcctgaacga 1435
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 481 atcatggtgtgaggtcattaacctgggcctnnnaaacctcaaagtgttaagcctgaacga 540
Query: 1436 ctgttg 1441
||||||
Sbjct: 541 ctgttg 546
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 331,311
Number of extensions: 6475
Number of successful extensions: 6475
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6474
Number of HSP's successfully gapped: 1
Length of query: 2623
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2606
Effective length of database: 8,119,229
Effective search space: 21158710774
Effective search space used: 21158710774
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)