BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01723 (UTR included)
(3355 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045A2C03 1604 0.0
>BF01045A2C03
Length = 847
Score = 1604 bits (809), Expect = 0.0
Identities = 831/838 (99%), Gaps = 1/838 (0%)
Strand = Plus / Plus
Query: 2359 tcaagaagttcacgtgtctcattaactgcacgccgtcgccgatagtctacagagcgtctc 2418
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tcaagaagttcacatgtctcattaactgcacgccgtcgccgatagtctacagagcgtctc 70
Query: 2419 ggtctaagtctcttttcatgtccgtgttgctcctcggtttcatgatatctatcttgcctg 2478
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ggtctaaatctcttttcatgtccgtgttgctcctcggtttcatgatatctatcttgcctg 130
Query: 2479 tggcgtattccatagcggagatagaaccgtctataacctgcggcccgttcagaggtttcg 2538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tggcgtattccatagcggagatagaaccgtctataacctgcggcccgttcagaggtttcg 190
Query: 2539 agacggtctggggcttcgtcatagaaactttcgaaggttttccatttctgataagggaga 2598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 agacggtctggggcttcgtcatagaaactttcgaaggttttccatttctgataagggaga 250
Query: 2599 tcgtgttccttcttggtacatctacgttcgctgttccggctttcgcgatattactctttc 2658
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttgtgttccttcttggtacatctacgttcgctgttccggctttcgcgatattactctttc 310
Query: 2659 ttctatactactactgggccgtcgccgccgctaacagacatatggtggaagttctgaaga 2718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttctatactactactgggccgtcgccgccgctaacagacatatggtggaagttctgaaga 370
Query: 2719 atcaattagttctggaaggacacgacaagcagttccttctgaacagactgagcgcgttca 2778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 atcaattagttctggaaggacacgacaagcagttccttctgaacagactgagcgcgttca 430
Query: 2779 taagacagcaccagaaaagatgtgagagaagaaatcggtccgatgaagattcttctgtcc 2838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 taagacagcaccagaaaagatgtgagagaagaaatcggtccgatgaagattcttctgtcc 490
Query: 2839 agcacagttatagataaaatattatattactgtcgtttcacattcctctgagagccacag 2898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agcacagttatagataaaatattatattactgtcgtttcacattcctctgagagccacag 550
Query: 2899 aaaatccagaataaacgaatagaaaattacttataacataacacaagataattagaaaat 2958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aaaatccagaataaacgaatagaaaattacttataacataacacaagataattagaaaat 610
Query: 2959 tttaaccgaacctagtcatttagatttatttccgtattttccgcagcagctctctcacca 3018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 611 tttaaccgaacctagtcatttagatttatttccgtattttccgcagcagctctctca-ca 669
Query: 3019 agcaacaaatgtatttgtaaatagcatttactagtacaacgtactgtttagtttaagtga 3078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 agcaacaaatgtatttgtaaatagcatttactagtacaacgtactgtttagtttaagtga 729
Query: 3079 tctcagtttattttatttagtgtaagtttatattaataattttccaatgaagtcactccg 3138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tctcagtttattttatttagtgtaagtttatattaataattttccaatgaagtcactccg 789
Query: 3139 atgttcctagactcacttgaccgaggcaactgtaagttatggaaaatatatttataca 3196
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 790 atgttcctagactcacttgaccgnnncaactgtaagttatggaaaatatatttataca 847
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 377,352
Number of extensions: 19791
Number of successful extensions: 19791
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19790
Number of HSP's successfully gapped: 1
Length of query: 3355
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3337
Effective length of database: 8,109,745
Effective search space: 27062219065
Effective search space used: 27062219065
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)