BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01729 (UTR included)
(1861 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B1F02 1487 0.0
>BF01023B1F02
Length = 798
Score = 1487 bits (750), Expect = 0.0
Identities = 787/799 (98%), Gaps = 1/799 (0%)
Strand = Plus / Plus
Query: 41 tgattataaatggactttgttaattgttaagtaaccttgagacggtgttaatagttgctt 100
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 tgattataaatggactttgttaattgttaagtaaccttgagacggtggtaatagttgctt 60
Query: 101 tattctaaaccggcgataatgttgaatttatacgcctaaaaacttataagttgcaatttt 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tattctaaaccggcgataatgttgaatttatacgcctaaaaacttataagttgcaatttt 120
Query: 161 aaattaaaaccaattaattcaaaacaacaaaattcgtattctttatggaaaagttttaat 220
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 121 aaattaaaaccaattaattcaaaacaacaaaattcgtatcctttatggaaaagttttaat 180
Query: 221 ttcagtaaattattgttgagtatatttcaaaccttagtcacaactacatcgatatatata 280
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcagtatattattgttgagtatatttcaaaccttagtcacaactacatcgatatatata 240
Query: 281 ttgtaactcgttggacgtacatattatatctaacatataatttacgatcgactataaaca 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgtaactcgttggacgtacatattatatctaacatataatttacgatcgactataaaca 300
Query: 341 ttgcaagtgtctaagtatatatttacataactaagtataaaacgacctccagtgcatacc 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgcaagtgtctaagtatatatttacataactaagtataaaacgacctccagtgcatacc 360
Query: 401 tagaataaaggagtgatttagcaacatgcctgtcattaatgtgaactcactcaagtggta 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagaataaaggagtgatttagcaacatgcctgtcattaatgtgaactcactcaagtggta 420
Query: 461 tgttaaatatattggcttgcccctcatttttagtgtgagtatgtaccgtttatgtggacg 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgttaaatatattggcttgcccctcatttttagtgtgagtatgtaccgtttatgtggacg 480
Query: 521 gctaagagatacaaaacgtagaaatgcactgcagggaaaggttgttgtcataactggtgc 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctaagagatacaaaacgtagaaatgcactgcagggaaaggttgttgtcataactggtgc 540
Query: 581 gagctcaggcattggtgaagctttagctcatgtgttctatgagtatggctgtaaagtagt 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagctcaggcattggtgaagctttagctcatgtgttctatgagtatggctgtaaagtagt 600
Query: 641 ccttgctgctaggaggaaaacagaattggaacgagtaaaaaatgatctattgtcaaagaa 700
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccttgctgctaggaggaaaacagaattggaacgagtaaaaaatgatctattgtcaaagan 660
Query: 701 aatttctctcccgacagaagagcccatagtactggagctagatctttcggatcttgagca 760
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 661 natttctctcccgtcagaagagcccatagtactggagctagatctttcagatcttgagca 720
Query: 761 attggaaacttttgttaccaaagttcatgaagtctgtagtgaaattgacattctgattaa 820
||||||||||||||||| | ||||||||||||||||| ||| ||||||||| ||||||||
Sbjct: 721 attggaaacttttgtta-cnaagttcatgaagtctgtggtggaattgacatactgattaa 779
Query: 821 taatggaggggtatctcat 839
|||||||||||||||||||
Sbjct: 780 taatggaggggtatctcat 798
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 268,452
Number of extensions: 5688
Number of successful extensions: 5688
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5687
Number of HSP's successfully gapped: 1
Length of query: 1861
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1844
Effective length of database: 8,119,229
Effective search space: 14971858276
Effective search space used: 14971858276
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)