BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01730 (UTR included)
(57,721 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A1E12 1536 0.0
>BF01062A1E12
Length = 785
Score = 1536 bits (775), Expect = 0.0
Identities = 782/785 (99%)
Strand = Plus / Plus
Query: 56322 gtcaacggtcttgcaagcttcgtgctagttatgcagaaacatcctaaacttgtcacatca 56381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcaacggtcttgcaagcttcgtgctagttatgcagaaacatcctaaacttgtcacatca 60
Query: 56382 aatgctaaagctttccatataaaatgtatctaccaaactggtgaacaaaatgtgacactt 56441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgctaaagctttccatataaaatgtatctaccaaactggtgaacaaaatgtgacactt 120
Query: 56442 gccttcaatgtgtctatgttaacaacagccggtactatagctaacactggccctccgcca 56501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccttcaatgtgtctatgttaacaacagccggtactatagctaacactggccctccgcca 180
Query: 56502 acttgttcgatgagaatcgtttcgcgaacgggcgatgaagttagctcagctgaaatcgga 56561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acttgttcgatgagaatcgtttcgcgaacgggcgatgaagttagctcagctgaaatcgga 240
Query: 56562 gagaacttagtactccaagttgatgtccaaccttcgagtatctatggtggtttcgcgcgt 56621
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 gagaacttagtactccaagttgatgtccaaccttcgagtatctatggtggttttgcgcgt 300
Query: 56622 agctgtatcgcaaaaactagcgaagttgcgacgaacatagaaaacgagtacactgtaaca 56681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agctgtatcgcaaaaactagcgaagttgcgacgaacatagaaaacgagtacactgtaaca 360
Query: 56682 gacgaagatggatgcgctacagacgcagcgatattcggcgaatgggagcgaagcgaagac 56741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacgaagatggatgcgctacagacgcagcgatattcggcgaatgggagcgaagcgaagac 420
Query: 56742 ggcagtgcattacgcgccgcctttaacgccttcaagttccctagcagcgacaatattcga 56801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcagtgcattacgcgccgcctttaacgccttcaagttccctagcagcgacaatattcga 480
Query: 56802 ttccaatgtaatatacgagtatgctttggaaaatgtcaaccggttaattgtcgcggttct 56861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttccaatgtaatatacgagtatgctttggaaaatgtcaaccggttaattgtcgcggttct 540
Query: 56862 gacgctttcggcaagcgtcgaaagcgagaagcgatcgacggagatagccctttggcgggt 56921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gacgctttcggcaagcgtcgaaagcgagaagcgatcgacggagatagccctttggcgggt 600
Query: 56922 caacttcgagaggaggtgactgtcgaatctaaccagattctgacgcttgaaagacgtgat 56981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caacttcgagaggaggtgactgtcgaatctaaccagattctgacgcttgaaagacgtgat 660
Query: 56982 ccatctagggcagctcgacaacgcgatggttcaggagacacaaatacgacaggtggcgcc 57041
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 661 ccatctagggcagctcgacaacgcgatggttcaggnnacacaaatacgacaggtggcgcc 720
Query: 57042 ggcgatgtgtgtgtttcagcggctgggctggccgtggcgcttgcattgacggcactcttg 57101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggcgatgtgtgtgtttcagcggctgggctggccgtggcgcttgcattgacggcactcttg 780
Query: 57102 gctct 57106
|||||
Sbjct: 781 gctct 785
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 714,017
Number of extensions: 76039
Number of successful extensions: 76039
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 76039
Number of HSP's successfully gapped: 1
Length of query: 57721
Length of database: 8,280,457
Length adjustment: 20
Effective length of query: 57701
Effective length of database: 8,090,777
Effective search space: 466845923677
Effective search space used: 466845923677
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 37 (73.8 bits)