BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01753 (UTR included)
(3523 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_242_C1 1247 0.0
>BF14_242_C1
Length = 920
Score = 1247 bits (629), Expect = 0.0
Identities = 674/688 (97%), Gaps = 2/688 (0%)
Strand = Plus / Plus
Query: 2836 tagcggccatcgtgctggtggggctggcgctgctgatgctgtggaagatggtcaccacca 2895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagcggccatcgtgctggtggggctggcgctgctgatgctgtggaagatggtcaccacca 60
Query: 2896 tacacgacaggagagagttcgcacgcttcgagaaggaacgcatgatggctaagtgggaca 2955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacacgacaggagagagttcgcacgcttcgagaaggaacgcatgatggctaagtgggaca 120
Query: 2956 cgggtgaaaatccgatttacaagcaagcgacatctacattcaaaaatccgacctacgccg 3015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgggtgaaaatccgatttacaagcaagcgacatctacattcaaaaatccgacctacgccg 180
Query: 3016 ggaaatagagatacatttagctgctggggcgcagcgcatataatatactataaagattat 3075
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 181 ggaaatagagatacatttagctgctggggcgcagcgtatataatatactataaagattat 240
Query: 3076 agagataaatgtaatgcattttaaaccatttagacttcagtattctgtaacgactagaag 3135
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 241 agagataaatgtaatgcattttaaaacatttagacttcagtattctataacgactagaag 300
Query: 3136 atttcacgtaaatcgtcgttcggatacgccttggagaagtgccttccgttaagactcttg 3195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atttcacgtaaatcgtcgttcggatacgccttggagaagtgccttccgttaagactcttg 360
Query: 3196 tcatacatattaataatctctttacaattaatcgatgcgtatttttaaaaacatataccg 3255
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcattcatattaataatctctttacaattaatcgatgcgtatttttaaaaacatataccg 420
Query: 3256 tataaatatataggtctgtaacaatctcggatattttatatatattatattagtggtaga 3315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tataaatatataggtctgtaacaatctcggatattttatatatattatattagtggtaga 480
Query: 3316 gtacgcttttgtacttacatgtgtgtgtgtgtgttggatgtgagtgtgtgttgagatttt 3375
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 481 gtacgcttttgtacttacatgtgtgtgtgtgtgttggatgt--ctgtgtgttgagatttt 538
Query: 3376 attgaatgattattaattgtatgtccaatggaatctttgcattactcaatggctattaat 3435
||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||
Sbjct: 539 attgaatgattattaattgtatggccaatggaatctttgcatgactcaatggctaggaat 598
Query: 3436 tataattaggtacgtgacatgacgttaacaatatacagttgtgtcatacgcataaatata 3495
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 599 tataattaggtacgtgacatgacgttaacaagatacagttgtgtcatacgcataaatata 658
Query: 3496 tatggatatgacgagtctgcaataatta 3523
||||||||||| |||| |||||||||||
Sbjct: 659 tatggatatgaagagtttgcaataatta 686
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 390,980
Number of extensions: 9749
Number of successful extensions: 9749
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9746
Number of HSP's successfully gapped: 1
Length of query: 3523
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3505
Effective length of database: 8,109,745
Effective search space: 28424656225
Effective search space used: 28424656225
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)