BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01755 (UTR included)
(1888 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3459_C1 571 e-162
>BF14_3459_C1
Length = 1273
Score = 571 bits (288), Expect = e-162
Identities = 291/292 (99%)
Strand = Plus / Plus
Query: 750 cccaagcgactgcacgtctccaacatccccttcagattcagagacccggacctcaggaac 809
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cccaagcgactgcacgtgtccaacatccccttcagattcagagacccggacctcaggaac 314
Query: 810 atgttcgggcaatatggaacgatacttgatgtagaaattatcttcaacgaacgcggctcc 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atgttcgggcaatatggaacgatacttgatgtagaaattatcttcaacgaacgcggctcc 374
Query: 870 aagggattcggttttgtaacattcgcaaatagtggtgatgcggagcgagcacgagagcgt 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aagggattcggttttgtaacattcgcaaatagtggtgatgcggagcgagcacgagagcgt 434
Query: 930 cttcacggcaccgtggttgagggcagaaagatagaggttaataacgccacagccagggtg 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cttcacggcaccgtggttgagggcagaaagatagaggttaataacgccacagccagggtg 494
Query: 990 cagacaaagaaaccacccgcggtgccaaacgtgtgtgtccagtggccggaag 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cagacaaagaaaccacccgcggtgccaaacgtgtgtgtccagtggccggaag 546
Score = 190 bits (96), Expect = 6e-48
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 655 ctccggcacaagcacctctaccgccgaccaacttttcaccccaaccgacacagcaacaca 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctccggcacaagcacctctaccgccgaccaacttttcaccccaaccgacacagcaacaca 60
Query: 715 cccagaactcgatagaaaaccaaaatcagaattcac 750
||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccagaactcgatagaaaaccaaaatcagaattcac 96
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,938
Number of extensions: 4804
Number of successful extensions: 4804
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4804
Number of HSP's successfully gapped: 2
Length of query: 1888
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1871
Effective length of database: 8,119,229
Effective search space: 15191077459
Effective search space used: 15191077459
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)