BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01769 (UTR included)
(1306 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053A1G11 1247 0.0
>BF01053A1G11
Length = 830
Score = 1247 bits (629), Expect = 0.0
Identities = 655/665 (98%)
Strand = Plus / Plus
Query: 480 gcattaatttgcttgggaatcatgtccattgggaagggcatgcagttttccaacaacccg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gcattaatttgcttgggaatcatgtccattgggaagggcatgcagttttccaacaacccg 188
Query: 540 acctctgaaatgtctgcagatgaaaaaggactggcgttcaataagacagagcaatcagat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 acctctgaaatgtctgcagatgaaaaaggactggcgttcaataagacagagcaatcagat 248
Query: 600 gaaagtggttatgaagtggaaagtgacgttgaagataaaaagtatctcgatgaggccatg 659
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 249 gaaagtggttatgaagtggaaggtgacgttgaagataaaaagtatctcgatgaggcaatg 308
Query: 660 aaaacagttctagacccaaatacagtaatactcaaaggtgacgaggttgttgaaaatttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaaacagttctagacccaaatacagtaatactcaaaggtgacgaggttgttgaaaatttt 368
Query: 720 aaaagtcaaattgataacttagaacatggaaatgcatcaatggaaacttttatgaaagaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaagtcaaattgataacttagaacatggaaatgcatcaatggaaacttttatgaaagaa 428
Query: 780 atggataaattaagtttagagatttgcaaaacatcacaggaatcgttatgggattatgtt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atggataaattaagtttagagatttgcaaaacatcacaggaatcgttatgggattatgtt 488
Query: 840 actgatatcaatagtgaaactaagaaaactagaatggttagaatcgcagctgaagaagat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 actgatatcaatagtgaaactaagaaaactagaatggttagaatcgcagctgaagaagat 548
Query: 900 gaaataaaaaagcaatattggacaatattgaagacaaaatatttaaattcagcccacaca 959
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 549 gaaataaaaaagcaatactggacaatattgaagaccaaatatttaaattcagcccacaca 608
Query: 960 tcagatgacgcccagctagcaagaaaagttagaattattcgagatcgtggaactaatgtc 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tcagatgacgcccagctagcaagaaaagttagaattattcgagatcgtggaactaatgtc 668
Query: 1020 ctgatgccccaaagtaagcaacgtgaagaaattgacacaatgcagcgaacatggagccga 1079
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ctaatgccccaaagtaagcaacgtgaagaaattgacacaatgcagcgaacatggagccgn 728
Query: 1080 gtggccgtctgcgcctacaatattagtatttgcaatgctgatgattcgatgcgtacaatg 1139
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 729 ntggccgtctgcgcctacaatattagtatatgcaatgctgatganncgatgcgtacaatg 788
Query: 1140 agcga 1144
|||||
Sbjct: 789 agcga 793
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 162,776
Number of extensions: 3097
Number of successful extensions: 3097
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3097
Number of HSP's successfully gapped: 1
Length of query: 1306
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1289
Effective length of database: 8,119,229
Effective search space: 10465686181
Effective search space used: 10465686181
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)