BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01778 (UTR included)
(2800 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B1H09 1271 0.0
BF14_9_C1 414 e-115
>BF01010B1H09
Length = 660
Score = 1271 bits (641), Expect = 0.0
Identities = 657/661 (99%), Gaps = 1/661 (0%)
Strand = Plus / Plus
Query: 184 ttggcataatttccatctgttttattttgctgtaatctattttcataactcatacattct 243
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 ttggcataatttccatctgttttattttgctgaaatctattttcataactcatacattct 60
Query: 244 acaagttaaagaatttctaagtgtactagtgattctggttctaattattcctgcgtacat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaagttaaagaatttctaagtgtactagtgattctggttctaattattcctgcgtacat 120
Query: 304 tatttcgacaaaacaatccaataagaatattaaattataaattcttgaataaaatcataa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatttcgacaaaacaatccaataagaatattaaattataaattcttgaataaaatcataa 180
Query: 364 agttacatattgtatctaattgaaaatattgtttatattaatttttttataaaacgatac 423
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 181 agttacatattgtatctaattgaaaatattgtttatattattttttttataaaacgatac 240
Query: 424 cactttgttgttgttattattttatgtgatgacatgatggtgtaagcgtttcgggaaaaa 483
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacttggttgttgttattattt-atgtgatgacatgatggtgtaagcgtttcgggaaaaa 299
Query: 484 ccaataatacagaaattatggacaagaacatggaatcccccaggacggagagccccgtcc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccaataatacagaaattatggacaagaacatggaatcccccaggacggagagccccgtcc 359
Query: 544 cggaagtggaaagacgggagagtgaaacagactattcaagtattagagggaaaatgatcc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cggaagtggaaagacgggagagtgaaacagactattcaagtattagagggaaaatgatcc 419
Query: 604 tggtgagccccacagctgatgaatatgatctgctgaggaaggaactcctggagagactgg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tggtgagccccacagctgatgaatatgatctgctgaggaaggaactcctggagagactgg 479
Query: 664 agacagggaacggagaaattatttacgacattggtcatggtgaagacggtcgcggtctga 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 agacagggaacggagaaattatttacgacattggtcatggtgaagacggtcgcggtctga 539
Query: 724 ctgaagacgagtacagcgcgtcagtagcgaccctgcagtccctggtgagcagcgagcgga 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ctgaagacgagtacagcgcgtcagtagcgaccctgcagtccctggtgagcagcgagcgga 599
Query: 784 tctcgtgtgtggaactgaggcgatgggactgcggaagcggggtggctggacagtacctcc 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tctcgtgtgtggaactgaggcgatgggactgcggaagcggggtggctggacagtacctcc 659
Query: 844 t 844
|
Sbjct: 660 t 660
>BF14_9_C1
Length = 1272
Score = 414 bits (209), Expect = e-115
Identities = 212/213 (99%)
Strand = Plus / Plus
Query: 2588 caacctcaagagagcgacgtcacagctgtggactctccgttcgagctgcaagcggacaag 2647
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 281 caacctcaagagagcgacgtcacagctgtggactctccgtttgagctgcaagcggacaag 340
Query: 2648 agaacagtcgcgcggcgccgcaagcgacacgacaagccgcacccccaacaccctcaacag 2707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agaacagtcgcgcggcgccgcaagcgacacgacaagccgcacccccaacaccctcaacag 400
Query: 2708 tcacagccgtcgcagccgcagcaccctcagcaccccacgccgggtcaatccgcgctggcc 2767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tcacagccgtcgcagccgcagcaccctcagcaccccacgccgggtcaatccgcgctggcc 460
Query: 2768 gccaactaactacaccgtttcggcaaaccgata 2800
|||||||||||||||||||||||||||||||||
Sbjct: 461 gccaactaactacaccgtttcggcaaaccgata 493
Score = 365 bits (184), Expect = e-100
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 2099 caccatctcctcacgataccaggccatggtccactgcggcagtatccgtcagacggcgtc 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caccatctcctcacgataccaggccatggtccactgcggcagtatccgtcagacggcgtc 60
Query: 2159 catcctgagcatgtcccgggactgtctccgcaccggggacaaggcgctcgtccgcttccg 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catcctgagcatgtcccgggactgtctccgcaccggggacaaggcgctcgtccgcttccg 120
Query: 2219 cttcataaaacatcccgagtacctgcggagaggacagagaatggtgttccgtgaaggtcg 2278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttcataaaacatcccgagtacctgcggagaggacagagaatggtgttccgtgaaggtcg 180
Query: 2279 cacc 2282
||||
Sbjct: 181 cacc 184
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 281,873
Number of extensions: 5707
Number of successful extensions: 5707
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5706
Number of HSP's successfully gapped: 3
Length of query: 2800
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2783
Effective length of database: 8,119,229
Effective search space: 22595814307
Effective search space used: 22595814307
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)