BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01779 (UTR included)
(3608 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3493_C1 973 0.0
>BF14_3493_C1
Length = 1001
Score = 973 bits (491), Expect = 0.0
Identities = 549/569 (96%), Gaps = 12/569 (2%)
Strand = Plus / Plus
Query: 2841 ttccccgtcgaggttctgtacacaaaggaaccggaaacggattacctggacgcctcctta 2900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttccccgtcgaggttctgtacacaaaggaaccggaaacggattacctggacgcctcctta 60
Query: 2901 ataaccgtcatgcaaatacatctgcgtgaaccgcccggggatattctgctgtttttgacc 2960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaccgtcatgcaaatacatctgcgtgaaccgcccggggatattctgctgtttttgacc 120
Query: 2961 ggccaggaggaaatcgacaccgcctgcgagatactgtacgagaggatgaagtccctcggc 3020
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 121 ggccaggaggaaatcgacaccgcctgcgaaatactgtacgagaggatgaagtccctcggc 180
Query: 3021 ccggatgtacctgagctgatcattcttccggtttactccgcccttccgtctgagatgcag 3080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccggatgtacctgagctgatcattcttccggtttactccgcccttccgtctgagatgcag 240
Query: 3081 accagaatcttcgaacccgctccgcctggctcgaggaaggtggtgatagctaccaacata 3140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accagaatcttcgaacccgctccgcctggctcgaggaaggtggtgatagctaccaacata 300
Query: 3141 gcggagacctcgctcaccatagacggcatttactacgtagtggaccccgggttcgtcaaa 3200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcggagacctcgctcaccatagacggcatttactacgtagtggaccccgggttcgtcaaa 360
Query: 3201 cagaaggtctacaattcaaagaccggtatggactcgttggtcgtcaccccgatctcacag 3260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagaaggtctacaattcaaagaccggtatggactcgttggtcgtcaccccgatctcacag 420
Query: 3261 gcggcggcgaa------agtcgctcggccagcacgcccagcgactggcccggggaagtgt 3314
||||||||||| || || ||| | | || |||||||||||||||||||
Sbjct: 421 gcggcggcgaagcagcgagccggtcgtgcgggtcg------gactggcccggggaagtgt 474
Query: 3315 taccgactgtacacggagcgcgcataccgggatgaaatgttgcccacccctgtcccggaa 3374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 taccgactgtacacggagcgcgcataccgggatgaaatgttgcccacccctgtcccggaa 534
Query: 3375 atacaaaggactaatctcgccactacagt 3403
|||||||||||||||||||||||||||||
Sbjct: 535 atacaaaggactaatctcgccactacagt 563
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 329,741
Number of extensions: 6084
Number of successful extensions: 6084
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6084
Number of HSP's successfully gapped: 2
Length of query: 3608
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3590
Effective length of database: 8,109,745
Effective search space: 29113984550
Effective search space used: 29113984550
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)