BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01780 (UTR included)
(1519 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_9_C1 831 0.0
>BF14_9_C1
Length = 1272
Score = 831 bits (419), Expect = 0.0
Identities = 440/446 (98%), Gaps = 2/446 (0%)
Strand = Plus / Minus
Query: 1074 cacacttccaactagatttattatttttttttttaaatgaatataatatccttttactta 1133
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1241 cacacttccaactaaatttattattttttttt--aaatgaatataatatccttttactta 1184
Query: 1134 aactattaaaatcacaacggttctgaaagtaaatactgtgatcgtggtacagaggaggtc 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 aactattaaaatcacaacggttctgaaagtaaatactgtgatcgtggtacagaggaggtc 1124
Query: 1194 gctagctttactcatgtgatgatttgttttggaaagttaatttaaattgttttctgtcac 1253
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1123 gctagctttactcatgtgatgattcgttttggaaagttaatttaaattgttttctgtcac 1064
Query: 1254 gtaaaatattaatcttcacatttgaacccttgaataactgaggcacattactaagtcgct 1313
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1063 gtaaaatattaatcttcacatttgaacccttgaataactgaggcacattactaaatcgct 1004
Query: 1314 aaaccacacatttaacaaacaagcaacgctatgttctagccatctttaattagaaacaca 1373
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1003 aaaccacacatttaacaaacaagcaacgctatgttctagccatttttaattagaaacaca 944
Query: 1374 aacaacctctatgatatgtctgtttagtcttcaacagcgaaaattaactttgacatttga 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 aacaacctctatgatatgtctgtttagtcttcaacagcgaaaattaactttgacatttga 884
Query: 1434 tacaaacaaaatataacacaccatttttatcatagaaataagacacctacatactccaga 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 tacaaacaaaatataacacaccatttttatcatagaaataagacacctacatactccaga 824
Query: 1494 gaatatttaacattgaagcttctcaa 1519
||||||||||||||||||||||||||
Sbjct: 823 gaatatttaacattgaagcttctcaa 798
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,803
Number of extensions: 7712
Number of successful extensions: 7712
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7711
Number of HSP's successfully gapped: 1
Length of query: 1519
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1502
Effective length of database: 8,119,229
Effective search space: 12195081958
Effective search space used: 12195081958
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)